UniProt Q8PYK9
Deoxyribodipyrimidine photo-lyase (Q8PYK9)
Deoxyribodipyrimidine photo-lyase (UniProt Q8PYK9), EC 4.1.99.3: 71 experimental structures on GenesisL1, 4 ligands bound, 294 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- Q8PYK9
- Protein
- Deoxyribodipyrimidine photo-lyase
- EC
- 4.1.99.3
- Experimental structures
- 71
- Predicted models
- 0
- Ligands
- 4
- Pockets
- 294 · 34 records with a druggable one
Structures
71 records of Q8PYK9 in the MolNFT archive: 71 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2XRY | X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei | x-ray diffraction | A | FAD, SO4 | 5 (best 0.83) |
| 2XRY | X-ray structure of archaeal class II cpd photolyase from methanosarcina mazei | x-ray diffraction | A | — | — |
| 2XRZ | X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei in complex with… | x-ray diffraction | A, B | FAD, SO4 | 17 (best 0.87) |
| 2XRZ | X-ray structure of archaeal class II cpd photolyase from methanosarcina mazei in complex with… | x-ray diffraction | A, B | — | — |
| 4CDM | Crystal structure of M. mazei photolyase soaked with synthetic 8-HDF | x-ray diffraction | A | — | — |
| 4CDM | Crystal structure of M. mazei photolyase soaked with synthetic 8-hdf | x-ray diffraction | A | — | — |
| 4CDN | Crystal structure of M. mazei photolyase with its in vivo reconstituted 8-HDF antenna chromophore | x-ray diffraction | A, B | — | — |
| 4CDN | Crystal structure of M. mazei photolyase with its in vivo reconstituted 8-hdf antenna chromophore | x-ray diffraction | A, B | — | — |
| 5O86 | Mutant of claas II CPD photolyase from Methanosarcina mazei - W388F | x-ray diffraction | A | FAD, SO4 | — |
| 5O86 | Mutant of claas II cpd photolyase from methanosarcina mazei - W388F | x-ray diffraction | A | FAD, SO4 | — |
| 5O8D | Mutant of class II CPD photolyase from Methanosarcina mazei - Y345F | x-ray diffraction | A | FAD, SO4 | 5 (best 0.84) |
| 5O8D | Mutant of class II cpd photolyase from methanosarcina mazei - Y345F | x-ray diffraction | A | FAD, SO4 | — |
| 5O8E | Mutant of class II CPD photolyase from Methanosarcina mazei | x-ray diffraction | A | FAD, SO4 | — |
| 5O8E | Mutant of class II cpd photolyase from methanosarcina mazei | x-ray diffraction | A | FAD, SO4 | — |
| 7VIW | Dark adapted MmCPDII during oxidized to semiqui TR-SFX studies | x-ray diffraction | A | SO4, FAD | — |
| 7VIW | Dark adapted mmcpdii during oxidized to semiquinone tr-sfx studies | x-ray diffraction | A | SO4, FAD | — |
| 7VIX | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (10 ns time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VIX | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (10 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VIY | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (50 ns time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VIY | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (50 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VIZ | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (250 ns time-point) | x-ray diffraction | A | SO4, FAD | 2 (best 0.85) |
| 7VIZ | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (250 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ0 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (1 us time-point) | x-ray diffraction | A | SO4, FAD | 3 (best 0.83) |
| 7VJ0 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (1 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ1 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (10 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ1 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (10 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ2 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (125 us time-point) | x-ray diffraction | A | FAD, SO4, NA | 4 (best 0.84) |
| 7VJ2 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (125 us time-point) | x-ray diffraction | A | FAD, SO4, NA | — |
| 7VJ3 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (400 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ3 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (400 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ4 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (1 ms time-point) | x-ray diffraction | A | SO4, FAD | 5 (best 0.84) |
| 7VJ4 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (1 ms time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ5 | class II photolyase MmCPDII oxidized to semiqui TR-SFX studies (5 ms time-point) | x-ray diffraction | A | SO4, FAD | 5 (best 0.84) |
| 7VJ5 | Class II photolyase mmcpdii oxidized to semiquinone tr-sfx studies (5 ms time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJ6 | SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the semiqui state | x-ray diffraction | A | SO4, FAD | 4 (best 0.83) |
| 7VJ6 | Sfx structure of archaeal class II cpd photolyase from methanosarcina mazei in the semiquinone state | x-ray diffraction | A | SO4, FAD | — |
| 7VJ7 | SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the fully reduced… | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJ7 | Sfx structure of archaeal class II cpd photolyase from methanosarcina mazei in the fully reduced… | x-ray diffraction | A | SO4, FAD | — |
| 7VJ8 | SFX structure of archaeal class II CPD photolyase from Methanosarcina mazei in the oxidized state | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJ8 | Sfx structure of archaeal class II cpd photolyase from methanosarcina mazei in the oxidized state | x-ray diffraction | A | SO4, FAD | — |
| 7VJ9 | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (semiqui dark structure) | x-ray diffraction | A | SO4, FAD | 4 (best 0.83) |
| 7VJ9 | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (semiquinone dark structure) | x-ray diffraction | A | SO4, FAD | — |
| 7VJA | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (10 ns time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJA | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (10 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJB | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (30 ns time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.83) |
| 7VJB | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (30 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJC | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (100 ns time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJC | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (100 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJE | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (300 ns time-point) | x-ray diffraction | A | SO4, FAD | 5 (best 0.83) |
| 7VJE | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (300 ns time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJG | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (1 us time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJG | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (1 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJH | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (5 us time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJH | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (5 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJI | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (10 us time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.84) |
| 7VJI | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (10 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJJ | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (30 us time-point) | x-ray diffraction | A | SO4, FAD | 4 (best 0.83) |
| 7VJJ | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (30 us time-point) | x-ray diffraction | A | SO4, FAD | — |
| 7VJK | class II photolyase MmCPDII semiqui to fully reduced TR-SFX studies (100 us time-point) | x-ray diffraction | A | SO4, FAD | 3 (best 0.84) |
| 7VJK | Class II photolyase mmcpdii semiquinone to fully reduced tr-sfx studies (100 us time-point) | x-ray diffraction | A | SO4, FAD | — |
11 records more on the page itself.
Ligands
Elsewhere
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