UniProt Q8EJW4
PrpF methylaconitate isomerase (Q8EJW4)
PrpF methylaconitate isomerase (UniProt Q8EJW4), EC 5.3.3.-: 6 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 52 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q8EJW4
- Protein
- PrpF methylaconitate isomerase
- EC
- 5.3.3.-
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 52 · 6 records with a druggable one
Structures
7 records of Q8EJW4 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2PVZ | Crystal structure of methylaconitate isomerase PrpF from Shewanella oneidensis | x-ray diffraction | A, B | CA | 8 (best 0.75) |
| 2PVZ | Crystal structure of methylaconitate isomerase prpf from shewanella oneidensis | x-ray diffraction | A, B | CA | 8 (best 0.75) |
| 2PW0 | crystal structure of trans-aconitate bound to methylaconitate isomerase PrpF from Shewanella… | x-ray diffraction | A, B | TRC | 7 (best 0.66) |
| 2PW0 | Crystal structure of trans-aconitate bound to methylaconitate isomerase prpf from shewanella… | x-ray diffraction | A, B | TRC | 7 (best 0.66) |
| 5K87 | crystal structure of malonate bound to methylaconitate isomerase PrpF from Shewanella oneidensis | x-ray diffraction | A, B | — | 9 (best 0.75) |
| 5K87 | Crystal structure of malonate bound to methylaconitate isomerase prpf from shewanella oneidensis | x-ray diffraction | A, B | — | 9 (best 0.75) |
| Q8EJW4 | AlphaFold monomer V2.0 prediction for 2-methyl-aconitate isomerase (Q8EJW4) | predicted | A | — | 4 (best 0.48) |
Ligands
Experiment against prediction
- 5K87 chain A against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.27 Å
- 5K87 chain A against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.27 Å
- 2PW0 chain A against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.44 Å
- 2PW0 chain A against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.44 Å
- 2PW0 chain B against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.44 Å
- 2PW0 chain B against the predicted model Q8EJW4: TM-score 1.00, RMSD 0.44 Å
- 5K87 chain B against the predicted model Q8EJW4: TM-score 0.99, RMSD 0.52 Å
- 5K87 chain B against the predicted model Q8EJW4: TM-score 0.99, RMSD 0.52 Å
- 2PVZ chain A against the predicted model Q8EJW4: TM-score 0.99, RMSD 0.62 Å
- 2PVZ chain A against the predicted model Q8EJW4: TM-score 0.99, RMSD 0.62 Å
Elsewhere
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