UniProt Q8DBF5
1-deoxy-D-xylulose 5-phosphate reductoisomerase (Q8DBF5)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (UniProt Q8DBF5), EC 1.1.1.267: 10 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 12 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q8DBF5
- Protein
- 1-deoxy-D-xylulose 5-phosphate reductoisomerase
- EC
- 1.1.1.267
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 12 · 2 records with a druggable one
Structures
11 records of Q8DBF5 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5KQO | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus | x-ray diffraction | A, B | PO4 | — |
| 5KQO | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from vibrio vulnificus | x-ray diffraction | A, B | PO4 | — |
| 5KRR | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus in complex with Mn(2+) | x-ray diffraction | A, B | CL, MN | 6 (best 0.71) |
| 5KRR | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from vibrio vulnificus in complex with MN(2+) | x-ray diffraction | A, B | CL, MN | — |
| 5KRV | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus in complex Arginine | x-ray diffraction | A, B | CL, SRT | — |
| 5KRV | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from vibrio vulnificus in complex arginine | x-ray diffraction | A, B | CL, SRT | — |
| 5KRY | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus | x-ray diffraction | A, B | — | — |
| 5KRY | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from vibrio vulnificus | x-ray diffraction | A, B | — | — |
| 5KS1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus | x-ray diffraction | A, B | PO4, MN | 6 (best 0.72) |
| 5KS1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase from vibrio vulnificus | x-ray diffraction | A, B | PO4, MN | — |
| Q8DBF5 | AlphaFold monomer V2.0 prediction for 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Q8DBF5) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5KRY chain B against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.56 Å
- 5KRY chain B against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.56 Å
- 5KRY chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.63 Å
- 5KRY chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.63 Å
- 5KRR chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.65 Å
- 5KRR chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.65 Å
- 5KS1 chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.65 Å
- 5KS1 chain A against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.65 Å
- 5KRV chain B against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.67 Å
- 5KRV chain B against the predicted model Q8DBF5: TM-score 0.95, RMSD 1.67 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.