UniProt Q88QV5
Coenzyme PQQ synthesis protein B (Q88QV5)
Coenzyme PQQ synthesis protein B (UniProt Q88QV5), EC 1.-.-.-: 16 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q88QV5
- Protein
- Coenzyme PQQ synthesis protein B
- EC
- 1.-.-.-
- Experimental structures
- 16
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 4 · 2 records with a druggable one
Structures
17 records of Q88QV5 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1XTO | Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida, Northeast… | x-ray diffraction | A | — | — |
| 1XTO | Crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida, northeast… | x-ray diffraction | A | — | — |
| 3JXP | Crystal Structure of the Coenzyme PQQ Synthesis Protein (PqqB) from Pseudomonas putida | x-ray diffraction | A | — | — |
| 3JXP | Crystal structure of the coenzyme pqq synthesis protein (pqqb) from pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z5Y | The 1.56-angstrom crystal structure of copper(II)-bound PqqB from Pseudomonas Putida | x-ray diffraction | A | — | — |
| 4Z5Y | The 1.56-ångström crystal structure of COPPER(II)-bound pqqb from pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z5Z | The 2.5-angstrom crystal structure of Mg(2+)-bound PqqB from Pseudomonas Putida | x-ray diffraction | A | — | — |
| 4Z5Z | The 2.5-ångström crystal structure of MG(2+)-bound pqqb from pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z60 | The 2.5-angstrom of crystal structure of Zn(2+)-bound PqqB from Pseudomonas Putida | x-ray diffraction | A | — | — |
| 4Z60 | The 2.5-ångström of crystal structure of ZN(2+)-bound pqqb from pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z67 | The 1.5-angstrom crystal structure of Mn(2+)-bound PqqB from Pseudomonas Putida | x-ray diffraction | A | — | — |
| 4Z67 | The 1.5-ångström crystal structure of MN(2+)-bound pqqb from pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z6X | The 1.68-angstrom crystal structure of acitive-site metal-free PqqB from Pseudomonas putida | x-ray diffraction | A | — | — |
| 4Z6X | The 1.68-ångström crystal structure of acitive-site metal-free pqqb from pseudomonas putida | x-ray diffraction | A | — | — |
| 6E13 | Pseudomonas putida PqqB with a non-physiological zinc at the active site binds the substrate mimic… | x-ray diffraction | A | ZN, CL, HKS | 2 (best 0.60) |
| 6E13 | Pseudomonas putida pqqb with a non-physiological zinc at the active site binds the substrate mimic… | x-ray diffraction | A | ZN, CL, HKS | — |
| Q88QV5 | AlphaFold monomer V2.0 prediction for coenzyme pqq synthesis protein B (Q88QV5) | predicted | A | — | 2 (best 0.61) |
Ligands
Experiment against prediction
- 6E13 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.24 Å
- 6E13 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.24 Å
- 4Z60 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.24 Å
- 4Z60 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.24 Å
- 4Z5Z chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.27 Å
- 4Z5Z chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.27 Å
- 4Z67 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.27 Å
- 4Z67 chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.27 Å
- 4Z5Y chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.32 Å
- 4Z5Y chain A against the predicted model Q88QV5: TM-score 0.98, RMSD 0.32 Å
Elsewhere
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