UniProt Q88FY1
2,5-dihydroxypyridine 5,6-dioxygenase (Q88FY1)
2,5-dihydroxypyridine 5,6-dioxygenase (UniProt Q88FY1), EC 1.13.11.9: 6 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 63 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- Q88FY1
- Protein
- 2,5-dihydroxypyridine 5,6-dioxygenase
- EC
- 1.13.11.9
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 63 · 4 records with a druggable one
Structures
7 records of Q88FY1 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7CN3 | 2,5-dihydroxypridine Dioxygenase in complex with 2,5-dihydroxypridine and product N-formylmaleamic… | x-ray diffraction | A, B, C, D, E, F | FE2, D6O, G6C | 20 (best 0.87) |
| 7CN3 | 2,5-dihydroxypridine dioxygenase in complex with 2,5-dihydroxypridine and product N-formylmaleamic… | x-ray diffraction | A, B, C, D, E, F | FE2, D6O, G6C | — |
| 7CNT | Structure of 2,5-dihydroxypridine Dioxygenase from Pseudomonas putida KT2440 in complex with… | x-ray diffraction | A, B, C, D, E, F | FE2 | 20 (best 0.87) |
| 7CNT | Structure of 2,5-dihydroxypridine dioxygenase from pseudomonas putida KT2440 in complex with… | x-ray diffraction | A, B, C, D, E, F | FE2 | — |
| 7CUP | Structure of 2,5-dihydroxypridine Dioxygenase from Pseudomonas putida KT2440 | x-ray diffraction | A, B, C, D, E, F | FE | 20 (best 0.88) |
| 7CUP | Structure of 2,5-dihydroxypridine dioxygenase from pseudomonas putida KT2440 | x-ray diffraction | A, B, C, D, E, F | FE | — |
| Q88FY1 | AlphaFold monomer V2.0 prediction for 2,5-dihydroxypyridine 5,6-dioxygenase (Q88FY1) | predicted | A | — | 3 (best 0.66) |
Ligands
Experiment against prediction
- 7CN3 chain E against the predicted model Q88FY1: TM-score 0.99, RMSD 0.72 Å
- 7CN3 chain F against the predicted model Q88FY1: TM-score 0.99, RMSD 0.72 Å
- 7CN3 chain D against the predicted model Q88FY1: TM-score 0.99, RMSD 0.74 Å
- 7CN3 chain C against the predicted model Q88FY1: TM-score 0.99, RMSD 0.75 Å
- 7CN3 chain C against the predicted model Q88FY1: TM-score 0.99, RMSD 0.75 Å
- 7CUP chain C against the predicted model Q88FY1: TM-score 0.99, RMSD 0.78 Å
- 7CUP chain D against the predicted model Q88FY1: TM-score 0.99, RMSD 0.79 Å
- 7CUP chain F against the predicted model Q88FY1: TM-score 0.99, RMSD 0.79 Å
- 7CN3 chain B against the predicted model Q88FY1: TM-score 0.99, RMSD 0.81 Å
- 7CUP chain E against the predicted model Q88FY1: TM-score 0.99, RMSD 0.81 Å
Elsewhere
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