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Ligand · D6O

D6O · (~{Z})-4-formamido-4-oxidanylidene-but-2-enoic acid

D6O, (~{Z})-4-formamido-4-oxidanylidene-but-2-enoic acid (C5 H5 N O4, 143.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
D6O
Formula
C5 H5 N O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

D6O in 2 structures; the first of them:

  • 7CN3 · 2,5-dihydroxypridine Dioxygenase in complex with 2,5-dihydroxypridine and product… · D6O A502 · binds THR73, MET102, HIS105, GLU177, TRP187, HIS189, PHE194, PHE196 and 5 more
  • 7CN3 · 2,5-dihydroxypridine dioxygenase in complex with 2,5-dihydroxypridine and product… · D6O A502 · binds THR73, MET102, HIS105, GLU177, TRP187, HIS189, PHE194, PHE196 and 5 more

Residues it binds most

HIS 4, MET 4, PHE 4, ARG 4, ASP 4, GLU 4, THR 4, TRP 4 (residue and the binding sites it lines).

Found with

  • G6C · 5-oxidanyl-1H-pyridin-2-one
  • FE2 · Fe (II) ion
  • EDO · 1,2-ethanediol
  • PGE · Triethylene glycol

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