UniProt Q6P1J9
Parafibromin (Q6P1J9)
Parafibromin (UniProt Q6P1J9): 21 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q6P1J9
- Protein
- Parafibromin
- Experimental structures
- 21
- Predicted models
- 1
Structures
22 records of Q6P1J9 in the MolNFT archive: 21 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5YDE | Crystal structure of a disease-related gene, hCDC73(1-111) | x-ray diffraction | A | — | — |
| 5YDE | Crystal structure of a disease-related gene, HCDC73(1-111) | x-ray diffraction | A | — | — |
| 5YDF | Crystal structure of a disease-related gene, hCDC73(1-100) | x-ray diffraction | A, B | — | — |
| 5YDF | Crystal structure of a disease-related gene, HCDC73(1-100) | x-ray diffraction | A, B | — | — |
| 6TED | Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric… | electron microscopy | X | — | — |
| 6TED | Structure of complete, activated transcription complex pol II-dsif- paf-SPT6 uncovers allosteric… | electron microscopy | X | — | — |
| 7OOP | Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) | electron microscopy | Z | — | — |
| 7OOP | Pol II-csb-csa-DDB1-uvssa-paf-SPT6 (structure 3) | electron microscopy | Z | — | — |
| 7OPC | Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 4) | electron microscopy | Z | — | — |
| 7OPC | Pol II-csb-CRL4CSA-uvssa-SPT6-paf (structure 4) | electron microscopy | Z | — | — |
| 7OPD | Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) | electron microscopy | Z | — | — |
| 7OPD | Pol II-csb-CRL4CSA-uvssa-SPT6-paf (structure 5) | electron microscopy | Z | — | — |
| 7UNC | Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome | electron microscopy | X | — | — |
| 7UND | Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38) | electron microscopy | X | — | — |
| 8A3Y | Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex | electron microscopy | X | — | — |
| 9EGX | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp +27 | electron microscopy | X | — | — |
| 9EGY | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-nucleosome, bp +27 | electron microscopy | X | — | — |
| 9EGZ | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, bp +27 | electron microscopy | X | — | — |
| 9EH0 | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 30 bp upstream | electron microscopy | X | — | — |
| 9EH1 | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-nucleosome, 20 bp upstream | electron microscopy | X | — | — |
| 9EH2 | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-SETD2-FACT nucleosome upstream | electron microscopy | X | — | — |
| Q6P1J9 | AlphaFold monomer V2.0 prediction for parafibromin (Q6P1J9) | predicted | A | — | — |
Experiment against prediction
- 5YDE chain A against the predicted model Q6P1J9: TM-score 0.98, RMSD 0.67 Å
- 5YDE chain A against the predicted model Q6P1J9: TM-score 0.98, RMSD 0.67 Å
- 5YDF chain B against the predicted model Q6P1J9: TM-score 0.97, RMSD 0.64 Å
- 5YDF chain B against the predicted model Q6P1J9: TM-score 0.97, RMSD 0.64 Å
- 5YDF chain A against the predicted model Q6P1J9: TM-score 0.97, RMSD 0.70 Å
- 5YDF chain A against the predicted model Q6P1J9: TM-score 0.97, RMSD 0.70 Å
- 7OOP chain Z against the predicted model Q6P1J9: TM-score 0.48, RMSD 1.65 Å
- 7OOP chain Z against the predicted model Q6P1J9: TM-score 0.48, RMSD 1.65 Å
- 7OPC chain Z against the predicted model Q6P1J9: TM-score 0.48, RMSD 1.65 Å
- 7OPD chain Z against the predicted model Q6P1J9: TM-score 0.48, RMSD 1.65 Å
Elsewhere
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