UniProt Q5H3Z2
Peptide deformylase (Q5H3Z2)
Peptide deformylase (UniProt Q5H3Z2), EC 3.5.1.88: 32 experimental structures on GenesisL1, 15 ligands bound, 8 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- Q5H3Z2
- Protein
- Peptide deformylase
- EC
- 3.5.1.88
- Experimental structures
- 32
- Predicted models
- 0
- Ligands
- 15
- Pockets
- 8 · 1 record with a druggable one
Structures
32 records of Q5H3Z2 in the MolNFT archive: 32 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4NT8 | Formyl-methionine-alanine complex structure of peptide deformylase from Xanthomoonas oryzae pv.… | x-ray diffraction | A | — | — |
| 4NT8 | Formyl-methionine-alanine complex structure of peptide deformylase from xanthomoonas oryzae pv.… | x-ray diffraction | A | — | — |
| 5CP0 | Mas complex structure of peptide deformylase from xanthomonas oryzae pv oryzae | x-ray diffraction | A | — | — |
| 5CPD | Methionine-alanine complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae | x-ray diffraction | A | CD, NA | — |
| 5CPD | Methionine-alanine complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | — | — |
| 5CVK | Structure of Xoo1075, a peptide deformyase from Xanthomonas oryzae pv. oryze, in complex with… | x-ray diffraction | A | CD, 56E, NA | — |
| 5CVK | Structure of XOO1075, a peptide deformyase from xanthomonas oryzae pv. oryze, in complex with… | x-ray diffraction | A | — | — |
| 5CVP | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with… | x-ray diffraction | A | CD, NA, 56F | — |
| 5CVP | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv oryze, in complex with… | x-ray diffraction | A | — | — |
| 5CVQ | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | CD, BB2 | 2 (best 0.46) |
| 5CVQ | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | — | — |
| 5CWX | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | CD, 56K | 1 (best 0.44) |
| 5CWX | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | — | — |
| 5CWY | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryze pv oryzae, in complex with… | x-ray diffraction | A | CD, 4WL, NA | 2 (best 0.58) |
| 5CWY | Structure of XOO1075, a peptide deformylase from xanthomonas oryze pv oryzae, in complex with… | x-ray diffraction | A | — | — |
| 5CX0 | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae, in complex with… | x-ray diffraction | A | CD, 56L | 1 (best 0.47) |
| 5CX0 | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv. oryzae, in complex with… | x-ray diffraction | A | — | — |
| 5CXJ | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | CD, 56T, NA | 2 (best 0.45) |
| 5CXJ | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv oryzae, in complex with… | x-ray diffraction | A | — | — |
| 5CY7 | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryze pv oryze, in complex with… | x-ray diffraction | A | CD, 56U, NA | — |
| 5CY7 | Structure of XOO1075, a peptide deformylase from xanthomonas oryze pv oryze, in complex with… | x-ray diffraction | A | — | — |
| 5CY8 | Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with… | x-ray diffraction | A | 56V, CD, NA | — |
| 5CY8 | Structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv oryze, in complex with… | x-ray diffraction | A | — | — |
| 5E5D | Native structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae | x-ray diffraction | A | CD | — |
| 5E5D | Native structure of XOO1075, a peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | — | — |
| 6IKT | K1U complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | CD, NI, K1U | — |
| 6IKY | K2U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae | x-ray diffraction | A | NI, K2U | — |
| 6IKY | K2U complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | NI, K2U | — |
| 6IL0 | K3U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae | x-ray diffraction | A | K3U, NI | — |
| 6IL0 | K3U complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | K3U, NI | — |
| 6IL2 | K4U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae | x-ray diffraction | A | CD | — |
| 6IL2 | K4U complex structure of peptide deformylase from xanthomonas oryzae pv. oryzae | x-ray diffraction | A | CD | — |
Ligands
- CD · Cadmium ion · in 14 records
- NA · Sodium ion · in 7 records
- NI · Nickel (II) ion · in 5 records
- K2U · (3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid · in 2 records
- K3U · S-(2-oxo-2-phenylethyl) (2R)-2-benzyl-4,4,4-trifluorobutanethioate · in 2 records
- 4WL · 4H-thieno[3,2-b]pyrole-5-carboxylic acid · in 1 record
- 56E · ethyl N-[(5-methylthiophen-3-yl)carbonyl]glycinate · in 1 record
- 56F · 1-(4-chlorophenyl)-N-methylmethanesulfonamide · in 1 record
- 56K · 3-(2-methyl-1,3-thiazol-4-yl)aniline · in 1 record
- 56L · 5-(propan-2-yl)-2-thioxodihydropyrimidine-4,6(1H,5H)-dione · in 1 record
- 56T · 2-(furan-2-yl)ethanamine · in 1 record
- 56U · 2-(difluoromethyl)-1H-benzimidazole · in 1 record
- 56V · (3R)-2,3-dihydro[1,3]thiazolo[3,2-a]benzimidazol-3-ol · in 1 record
- BB2 · Actinonin · in 1 record
- K1U · (3R)-3-benzyl-4-oxo-4-[(2-oxo-2-phenylethyl) sulfanyl]butanoic acid · in 1 record
Elsewhere
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