UniProt Q55354
Photosystem II reaction center protein L (Q55354)
Photosystem II reaction center protein L (UniProt Q55354): 6 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 8 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q55354
- Protein
- Photosystem II reaction center protein L
- Experimental structures
- 6
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 8 · 3 records with a druggable one
Structures
7 records of Q55354 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6WJ6 | Cryo-EM structure of apo-Photosystem II from Synechocystis sp. PCC 6803 | electron microscopy | L | CLA, LMG, PL9, LHG, SQD | 1 (best 0.85) |
| 6WJ6 | Cryo-EM structure of apo-photosystem II from synechocystis sp. pcc 6803 | electron microscopy | L | CLA, LMG, PL9, LHG, SQD | — |
| 7N8O | High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp.… | electron microscopy | L, l | SQD, CLA, BCR, LMG, LHG, PL9 | 3 (best 0.83) |
| 7N8O | High-resolution structure of photosystem II from the mesophilic cyanobacterium, synechocystis sp.… | electron microscopy | L, l | SQD, CLA, BCR, LMG, LHG, PL9 | — |
| 7RCV | High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp.… | electron microscopy | L, l | SQD, CLA, BCR, LMG, PL9, LHG | 4 (best 0.82) |
| 7RCV | High-resolution structure of photosystem II from the mesophilic cyanobacterium, synechocystis sp.… | electron microscopy | L, l | SQD, CLA, LMG, PL9, LHG | — |
| Q55354 | AlphaFold monomer V2.0 prediction for photosystem II reaction center protein L (Q55354) | predicted | A | — | — |
Ligands
- CLA · Chlorophyll A · in 6 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 6 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 6 records
- PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone · in 6 records
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 6 records
- BCR · Beta-carotene · in 3 records
Experiment against prediction
- 6WJ6 chain L against the predicted model Q55354: TM-score 0.89, RMSD 0.77 Å
- 6WJ6 chain L against the predicted model Q55354: TM-score 0.89, RMSD 0.77 Å
- 7N8O chain L against the predicted model Q55354: TM-score 0.85, RMSD 1.29 Å
- 7N8O chain L against the predicted model Q55354: TM-score 0.85, RMSD 1.29 Å
- 7N8O chain l against the predicted model Q55354: TM-score 0.85, RMSD 1.29 Å
- 7RCV chain l against the predicted model Q55354: TM-score 0.85, RMSD 1.28 Å
- 7RCV chain L against the predicted model Q55354: TM-score 0.85, RMSD 1.28 Å
- 7RCV chain L against the predicted model Q55354: TM-score 0.85, RMSD 1.28 Å
Elsewhere
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