UniProt Q500V5
Q500V5
Q500V5 (UniProt Q500V5): 8 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q500V5
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 1
Structures
9 records of Q500V5 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5ZWZ | Crystal structure of Arabidopsis thaliana AGDP1 AGD34 | x-ray diffraction | A | — | — |
| 5ZWZ | Crystal structure of arabidopsis thaliana AGDP1 AGD34 | x-ray diffraction | A | — | — |
| 6IE4 | Crystal structure of ADCP1 tandem Agenet domain 1-2 in complex with H3K9me1 | x-ray diffraction | A, C | — | — |
| 6IE4 | Crystal structure of ADCP1 tandem agenet domain 1-2 in complex with H3K9ME1 | x-ray diffraction | A, C | — | — |
| 6IE5 | Crystal structure of ADCP1 tandem Agenet domain 3-4 | x-ray diffraction | A | — | — |
| 6IE5 | Crystal structure of ADCP1 tandem agenet domain 3-4 | x-ray diffraction | A | — | — |
| 6IE6 | Crystal structure of ADCP1 tandem agenet domain 3-4 in complex with H3K9ME2 | x-ray diffraction | A | — | — |
| 6IE7 | Crystal structure of ADCP1 tandem agenet domain 1-2 in complex with H3K9ME2 | x-ray diffraction | A, B, C, D | NH4 | — |
| Q500V5 | AlphaFold monomer V2.0 prediction for protein agenet domain (agd)-containing P1 (Q500V5) | predicted | A | — | — |
Ligands
- NH4 · Ammonium ion · in 1 record
Experiment against prediction
- 6IE5 chain A against the predicted model Q500V5: TM-score 0.98, RMSD 0.73 Å
- 6IE5 chain A against the predicted model Q500V5: TM-score 0.98, RMSD 0.73 Å
- 5ZWZ chain A against the predicted model Q500V5: TM-score 0.97, RMSD 0.74 Å
- 5ZWZ chain A against the predicted model Q500V5: TM-score 0.97, RMSD 0.74 Å
- 6IE6 chain A against the predicted model Q500V5: TM-score 0.97, RMSD 0.90 Å
- 6IE7 chain B against the predicted model Q500V5: TM-score 0.97, RMSD 0.82 Å
- 6IE4 chain C against the predicted model Q500V5: TM-score 0.97, RMSD 0.84 Å
- 6IE4 chain C against the predicted model Q500V5: TM-score 0.97, RMSD 0.84 Å
- 6IE7 chain D against the predicted model Q500V5: TM-score 0.96, RMSD 0.88 Å
- 6IE4 chain A against the predicted model Q500V5: TM-score 0.96, RMSD 0.92 Å
Elsewhere
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