UniProt Q4R102
Protein ShdD (Q4R102)
Protein ShdD (UniProt Q4R102): 5 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 27 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q4R102
- Protein
- Protein ShdD
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 27 · 3 records with a druggable one
Structures
6 records of Q4R102 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7AE4 | Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in closed form | x-ray diffraction | a, b, c, d, e, f | ZN | 12 (best 0.87) |
| 7AE5 | Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in open form | x-ray diffraction | b, c, d, e, f, a | ZN | 10 (best 0.73) |
| 7AE5 | Structure of sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (shvdccd) in open form | x-ray diffraction | b, c, d, e, f, a | ZN | — |
| 7AE7 | Structure of Sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (ShVdcCD) in open form… | x-ray diffraction | a, b, c, d, e, f | ZN | 5 (best 0.74) |
| 7AE7 | Structure of sedimentibacter hydroxybenzoicus vanillic acid decarboxylase (shvdccd) in open form… | x-ray diffraction | a, b, c, d, e, f | ZN | — |
| Q4R102 | AlphaFold monomer V2.0 prediction for protein shdd (Q4R102) | predicted | A | — | — |
Ligands
- ZN · Zinc ion · in 5 records
Experiment against prediction
- 7AE7 chain a against the predicted model Q4R102: TM-score 0.96, RMSD 0.53 Å
- 7AE7 chain a against the predicted model Q4R102: TM-score 0.96, RMSD 0.53 Å
- 7AE5 chain f against the predicted model Q4R102: TM-score 0.94, RMSD 0.70 Å
- 7AE5 chain f against the predicted model Q4R102: TM-score 0.94, RMSD 0.70 Å
- 7AE5 chain a against the predicted model Q4R102: TM-score 0.94, RMSD 0.95 Å
- 7AE5 chain a against the predicted model Q4R102: TM-score 0.94, RMSD 0.95 Å
- 7AE7 chain b against the predicted model Q4R102: TM-score 0.93, RMSD 0.67 Å
- 7AE7 chain b against the predicted model Q4R102: TM-score 0.93, RMSD 0.67 Å
- 7AE5 chain b against the predicted model Q4R102: TM-score 0.92, RMSD 1.12 Å
- 7AE5 chain b against the predicted model Q4R102: TM-score 0.92, RMSD 1.12 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.