UniProt Q47VZ4
Oligoribonuclease (Q47VZ4)
Oligoribonuclease (UniProt Q47VZ4), EC 3.1.-.-: 8 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 15 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q47VZ4
- Protein
- Oligoribonuclease
- EC
- 3.1.-.-
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 15 · 6 records with a druggable one
Structures
9 records of Q47VZ4 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6A4A | Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | x-ray diffraction | A | MG | 2 (best 0.38) |
| 6A4A | Oligoribonuclease (orn) from colwellia psychrerythraea strain 34H | x-ray diffraction | A | MG | 2 (best 0.38) |
| 6A4D | pNP-TMP bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | x-ray diffraction | A, B | 9RC | 1 (best 0.75) |
| 6A4D | Pnp-tmp bound oligoribonuclease (orn) from colwellia psychrerythraea strain 34H | x-ray diffraction | A, B | 9RC | 1 (best 0.75) |
| 6A4E | Two linked uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | x-ray diffraction | A, C | — | 3 (best 0.63) |
| 6A4E | Two linked uridine bound oligoribonuclease (orn) from colwellia psychrerythraea strain 34H | x-ray diffraction | A, C | — | 3 (best 0.63) |
| 6A4F | Separated uridine bound Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H | x-ray diffraction | A, B | U5P, MN | 1 (best 0.77) |
| 6A4F | Separated uridine bound oligoribonuclease (orn) from colwellia psychrerythraea strain 34H | x-ray diffraction | A, B | U5P, MN | 1 (best 0.77) |
| Q47VZ4 | AlphaFold monomer V2.0 prediction for oligoribonuclease (Q47VZ4) | predicted | A | — | 1 (best 0.45) |
Ligands
Experiment against prediction
- 6A4F chain A against the predicted model Q47VZ4: TM-score 0.98, RMSD 0.36 Å
- 6A4F chain A against the predicted model Q47VZ4: TM-score 0.98, RMSD 0.36 Å
- 6A4D chain B against the predicted model Q47VZ4: TM-score 0.99, RMSD 0.47 Å
- 6A4D chain B against the predicted model Q47VZ4: TM-score 0.99, RMSD 0.47 Å
- 6A4D chain A against the predicted model Q47VZ4: TM-score 0.98, RMSD 0.51 Å
- 6A4D chain A against the predicted model Q47VZ4: TM-score 0.98, RMSD 0.51 Å
- 6A4E chain A against the predicted model Q47VZ4: TM-score 0.99, RMSD 0.55 Å
- 6A4E chain A against the predicted model Q47VZ4: TM-score 0.99, RMSD 0.55 Å
- 6A4A chain A against the predicted model Q47VZ4: TM-score 0.97, RMSD 1.00 Å
- 6A4A chain A against the predicted model Q47VZ4: TM-score 0.97, RMSD 1.00 Å
Elsewhere
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