UniProt Q3UH93
Plexin-D1 (Q3UH93)
Plexin-D1 (UniProt Q3UH93): 4 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 48 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q3UH93
- Protein
- Plexin-D1
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 48 · 3 records with a druggable one
Structures
5 records of Q3UH93 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5V6R | Structure of Plexin D1 intracellular domain | x-ray diffraction | A, B | — | 18 (best 0.71) |
| 5V6R | Structure of plexin D1 intracellular domain | x-ray diffraction | A, B | — | — |
| 5V6T | The Plexin D1 intracellular region in complex with GIPC1 | x-ray diffraction | A | SO4 | 10 (best 0.66) |
| 5V6T | The plexin D1 intracellular region in complex with GIPC1 | x-ray diffraction | A | SO4 | — |
| Q3UH93 | AlphaFold monomer V2.0 prediction for plexin-D1 (Q3UH93) | predicted | A | — | 20 (best 0.78) |
Ligands
- SO4 · Sulfate ion · in 2 records
Experiment against prediction
- 5V6R chain B against the predicted model Q3UH93: TM-score 0.98, RMSD 1.38 Å
- 5V6R chain B against the predicted model Q3UH93: TM-score 0.98, RMSD 1.38 Å
- 5V6R chain A against the predicted model Q3UH93: TM-score 0.98, RMSD 1.39 Å
- 5V6R chain A against the predicted model Q3UH93: TM-score 0.98, RMSD 1.39 Å
- 5V6T chain A against the predicted model Q3UH93: TM-score 0.97, RMSD 1.46 Å
- 5V6T chain A against the predicted model Q3UH93: TM-score 0.97, RMSD 1.46 Å
Elsewhere
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