UniProt Q2SWE7
Nucleoside diphosphate kinase (Q2SWE7)
Nucleoside diphosphate kinase (UniProt Q2SWE7): 6 experimental structures and 1 predicted model on GenesisL1, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q2SWE7
- Protein
- Nucleoside diphosphate kinase
- Experimental structures
- 6
- Predicted models
- 1
- Pockets
- 1 · 0 records with a druggable one
Structures
7 records of Q2SWE7 in the MolNFT archive: 6 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4DUT | The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis | x-ray diffraction | A, B | — | — |
| 4DUT | The structure of nucleoside diphosphate kinase (ndk) from burkholderia thailandensis | x-ray diffraction | A, B | — | — |
| 4EK2 | The structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to… | x-ray diffraction | A, B | — | — |
| 4EK2 | The structure of nucleoside diphosphate kinase (ndk) from burkholderia thailandensis bound to… | x-ray diffraction | A, B | — | — |
| 4HR2 | Structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to ADP | x-ray diffraction | A, B | — | — |
| 4HR2 | Structure of nucleoside diphosphate kinase (ndk) from burkholderia thailandensis bound to ADP | x-ray diffraction | A, B | — | — |
| Q2SWE7 | AlphaFold monomer V2.0 prediction for nucleoside diphosphate kinase (Q2SWE7) | predicted | A | — | 1 (best 0.44) |
Experiment against prediction
- 4EK2 chain A against the predicted model Q2SWE7: TM-score 0.98, RMSD 0.40 Å
- 4EK2 chain A against the predicted model Q2SWE7: TM-score 0.98, RMSD 0.40 Å
- 4DUT chain B against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.43 Å
- 4DUT chain B against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.43 Å
- 4DUT chain A against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.49 Å
- 4DUT chain A against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.49 Å
- 4HR2 chain A against the predicted model Q2SWE7: TM-score 0.98, RMSD 0.52 Å
- 4HR2 chain A against the predicted model Q2SWE7: TM-score 0.98, RMSD 0.52 Å
- 4EK2 chain B against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.64 Å
- 4EK2 chain B against the predicted model Q2SWE7: TM-score 0.99, RMSD 0.64 Å
Elsewhere
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