UniProt Q03660
Trafficking protein particle complex II-specific subunit 130 (Q03660)
Trafficking protein particle complex II-specific subunit 130 (UniProt Q03660): 15 experimental structures and 1 predicted model on GenesisL1, 81 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- Q03660
- Protein
- Trafficking protein particle complex II-specific subunit 130
- Experimental structures
- 15
- Predicted models
- 1
- Pockets
- 81 · 9 records with a druggable one
Structures
16 records of Q03660 in the MolNFT archive: 15 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7E2C | Monomer of TRAPPII (open) | electron microscopy | I | — | 6 (best 0.82) |
| 7E2C | Monomer of trappii (open) | electron microscopy | I | — | — |
| 7E2D | Monomer of TRAPPII (Closed) | electron microscopy | I | — | 7 (best 0.83) |
| 7E2D | Monomer of trappii (closed) | electron microscopy | I | — | — |
| 7E8S | Intact TRAPPII (state I). | electron microscopy | I, T | — | 10 (best 0.82) |
| 7E8S | Intact trappii (state I). | electron microscopy | I, T | — | — |
| 7E8T | Monomer of Ypt32-TRAPPII | electron microscopy | I | — | 9 (best 0.82) |
| 7E8T | Monomer of YPT32-trappii | electron microscopy | I | — | — |
| 7E93 | Intact TRAPPII (state III). | electron microscopy | I, T | — | 10 (best 0.82) |
| 7E93 | Intact trappii (state III). | electron microscopy | I, T | — | — |
| 7E94 | Intact TRAPPII (State II) | electron microscopy | I, T | — | 11 (best 0.82) |
| 7E94 | Intact trappii (state II) | electron microscopy | I, T | — | — |
| 7EA3 | Intact YPT32-trappii (dimer). | electron microscopy | I, V | — | — |
| 7U05 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/closed state (composite structure) | electron microscopy | B, b | — | 8 (best 0.79) |
| 7U06 | Structure of the yeast TRAPPII-Rab11/Ypt32 complex in the closed/open state (composite structure) | electron microscopy | B, b | — | 7 (best 0.80) |
| Q03660 | AlphaFold monomer V2.0 prediction for trafficking protein particle complex II-specific subunit 130… | predicted | A | — | 13 (best 0.78) |
Experiment against prediction
- 7U06 chain B against the predicted model Q03660: TM-score 0.71, RMSD 4.91 Å
- 7U06 chain b against the predicted model Q03660: TM-score 0.66, RMSD 4.38 Å
- 7U05 chain B against the predicted model Q03660: TM-score 0.64, RMSD 4.60 Å
- 7U05 chain b against the predicted model Q03660: TM-score 0.64, RMSD 4.54 Å
- 7E93 chain T against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
- 7E2C chain I against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
- 7E94 chain T against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
- 7E2C chain I against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
- 7E94 chain T against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
- 7E93 chain I against the predicted model Q03660: TM-score 0.63, RMSD 5.74 Å
Elsewhere
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