UniProt P77774
Outer membrane protein assembly factor BamB (P77774)
Outer membrane protein assembly factor BamB (UniProt P77774): 66 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 136 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- P77774
- Protein
- Outer membrane protein assembly factor BamB
- Experimental structures
- 66
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 136 · 28 records with a druggable one
Structures
67 records of P77774 in the MolNFT archive: 66 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2YH3 | The structure of BamB from E. coli | x-ray diffraction | A | — | — |
| 2YH3 | The structure of bamb from E. COLI | x-ray diffraction | A | — | — |
| 2YMS | Structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence… | x-ray diffraction | A, B, C, D | — | — |
| 2YMS | Structure and assembly of a B-propeller with nine blades and a new conserved repetitive sequence… | x-ray diffraction | A, B, C, D | — | — |
| 3P1L | Crystal structure of Escherichia coli BamB, a lipoprotein component of the beta-barrel assembly… | x-ray diffraction | A | — | — |
| 3P1L | Crystal structure of escherichia COLI bamb, a lipoprotein component of the beta-barrel assembly… | x-ray diffraction | A | — | — |
| 3PRW | Crystal structure of the lipoprotein BamB | x-ray diffraction | A | — | — |
| 3PRW | Crystal structure of the lipoprotein bamb | x-ray diffraction | A | — | — |
| 3Q7M | The crystal structure of BamB from the BAM complex in spacegroup I222 | x-ray diffraction | A | — | — |
| 3Q7M | The crystal structure of bamb from the bam complex in spacegroup I222 | x-ray diffraction | A | — | — |
| 3Q7N | The crystal structure of BamB from the BAM complex in spacegroup P212121 | x-ray diffraction | A | — | — |
| 3Q7N | The crystal structure of bamb from the bam complex in spacegroup P212121 | x-ray diffraction | A | — | — |
| 3Q7O | The crystal structure of BamB from the BAM complex in spacegroup P213 | x-ray diffraction | A | — | — |
| 3Q7O | The crystal structure of bamb from the bam complex in spacegroup P213 | x-ray diffraction | A | — | — |
| 4PK1 | Structure of BamB fused to a BamA POTRA domain fragment | x-ray diffraction | A | — | — |
| 4PK1 | Structure of bamb fused to a bama potra domain fragment | x-ray diffraction | A | — | — |
| 4XGA | Crystal structure of BamB and BamA P3-5 complex from E.coli | x-ray diffraction | A | CA | 3 (best 0.77) |
| 4XGA | Crystal structure of bamb and bama P3-5 complex from E.COLI | x-ray diffraction | A | — | — |
| 5AYW | Structure of a membrane complex | x-ray diffraction | B | — | — |
| 5AYW | Structure of a membrane complex | x-ray diffraction | B | — | — |
| 5D0O | BamABCDE complex, outer membrane beta barrel assembly machinery entire complex | x-ray diffraction | B | — | 3 (best 0.77) |
| 5D0O | Bamabcde complex, outer membrane beta barrel assembly machinery entire complex | x-ray diffraction | B | — | — |
| 5LJO | E. coli BAM complex (BamABCDE) by cryoEM | electron microscopy | B | — | — |
| 5LJO | E. COLI bam complex (bamabcde) by cryoem | electron microscopy | B | — | — |
| 6LYQ | Structure of the BAM complex | x-ray diffraction | B | — | — |
| 6LYQ | Structure of the bam complex | x-ray diffraction | B | — | — |
| 6LYR | Structure of the BAM complex | x-ray diffraction | B | — | — |
| 6LYR | Structure of the bam complex | x-ray diffraction | B | — | — |
| 6LYS | Structure of the BAM complex | x-ray diffraction | B | — | — |
| 6LYS | Structure of the bam complex | x-ray diffraction | B | — | — |
| 6LYU | Structure of the BAM complex | electron microscopy | B | — | — |
| 6LYU | Structure of the bam complex | electron microscopy | B | — | — |
| 6V05 | Cryo-EM structure of a substrate-engaged bam complex | electron microscopy | B | — | — |
| 7BNQ | Lateral-closed conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM | electron microscopy | B | — | 5 (best 0.75) |
| 7BNQ | Lateral-closed conformation of the lid-locked bam complex (bama E435C S665C, bambdce) by cryoem | electron microscopy | B | — | — |
| 7NBX | Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM | electron microscopy | B | — | 7 (best 0.81) |
| 7NBX | Lateral-open conformation of the lid-locked bam complex (bama E435C S665C, bambdce) by cryoem | electron microscopy | B | — | — |
| 7NCS | Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) bound by a… | electron microscopy | B | — | 9 (best 0.80) |
| 7NCS | Lateral-open conformation of the lid-locked bam complex (bama E435C S665C, bambdce) bound by a… | electron microscopy | B | — | — |
| 7ND0 | lateral-open conformation of the wild-type BAM complex (BamABCDE) bound to a bactericidal Fab… | electron microscopy | B | — | 8 (best 0.77) |
| 7ND0 | Lateral-open conformation of the wild-type bam complex (bamabcde) bound to a bactericidal Fab… | electron microscopy | B | — | — |
| 7NRI | Structure of the darobactin-bound E. COLI bam complex (bamabcde) | electron microscopy | B | — | — |
| 7R1W | E. coli BAM complex (BamABCDE) bound to dynobactin A | electron microscopy | B | — | 3 (best 0.79) |
| 7TTC | Bamabcde bound to substrate espp | electron microscopy | B | — | — |
| 7YE4 | BAM-EspP complex structure with BamA-G431C and G781C/EspP-N1293C and A1043C mutations in nanodisc | electron microscopy | B | — | 3 (best 0.76) |
| 7YE6 | BAM-EspP complex structure with BamA-N427C/EspP-R1297C mutations in nanodisc | electron microscopy | B | — | 3 (best 0.70) |
| 8ADG | Cryo-EM structure of Darobactin 22 bound BAM complex | electron microscopy | B | — | 5 (best 0.79) |
| 8ADI | Cryo-EM structure of Darobactin 9 bound BAM complex | electron microscopy | B | — | 4 (best 0.79) |
| 8BO2 | BAM-EspP complex structure with BamA-S425C/EspP-S1299C mutations in nanodisc | electron microscopy | B | — | — |
| 8BVQ | E. coli BAM complex (BamABCDE) bound to darobactin B | electron microscopy | B | — | 3 (best 0.77) |
| 8BWC | E. coli BAM complex (BamABCDE) wild-type | electron microscopy | B | — | 6 (best 0.72) |
| 8PZ1 | Wait Complex: Lateral open BAM bound Compact SurA | electron microscopy | B | — | 7 (best 0.82) |
| 8PZ2 | Wait Complex: Lateral open BAM bound Extended SurA | electron microscopy | B | — | 4 (best 0.77) |
| 8PZV | Wait Complex: BAM bound Darobactin-B and Extended SurA | electron microscopy | B | MG | 6 (best 0.73) |
| 8Q0G | Release Complex: BAM bound EspP and Compact SurA | electron microscopy | B | — | 5 (best 0.83) |
| 8QN4 | Structure of BAM-EspP complex in the non-closing EspP state | electron microscopy | B | — | 7 (best 0.66) |
| 8QP5 | Release Complex: BAM bound EspP (SurA released) | electron microscopy | B | — | 5 (best 0.77) |
| 8QPU | Release Complex: BAM bound EspP and Extended SurA | electron microscopy | B | — | 4 (best 0.78) |
| 8QPV | Handover Complex: BAM bound OmpX and extended SurA | electron microscopy | B | — | 5 (best 0.76) |
| 8QPW | Arrival Complex: Lateral open BAM bound extended SurA plus OmpX | electron microscopy | B | — | 5 (best 0.79) |
7 records more on the page itself.
Ligands
Experiment against prediction
- 4XGA chain A against the predicted model P77774: TM-score 0.98, RMSD 0.91 Å
- 4XGA chain A against the predicted model P77774: TM-score 0.98, RMSD 0.91 Å
- 2YMS chain B against the predicted model P77774: TM-score 0.98, RMSD 0.40 Å
- 2YMS chain B against the predicted model P77774: TM-score 0.98, RMSD 0.40 Å
- 3Q7M chain A against the predicted model P77774: TM-score 0.98, RMSD 1.03 Å
- 3Q7M chain A against the predicted model P77774: TM-score 0.98, RMSD 1.03 Å
- 5AYW chain B against the predicted model P77774: TM-score 0.98, RMSD 0.94 Å
- 5AYW chain B against the predicted model P77774: TM-score 0.98, RMSD 0.94 Å
- 9CNW chain B against the predicted model P77774: TM-score 0.98, RMSD 0.95 Å
- 9CNY chain B against the predicted model P77774: TM-score 0.98, RMSD 0.98 Å
Elsewhere
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