UniProt P68440
Scaffold protein D13 (P68440)
Scaffold protein D13 (UniProt P68440): 26 experimental structures on GenesisL1, 7 ligands bound, 60 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- P68440
- Protein
- Scaffold protein D13
- Experimental structures
- 26
- Predicted models
- 0
- Ligands
- 7
- Pockets
- 60 · 3 records with a druggable one
Structures
26 records of P68440 in the MolNFT archive: 26 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2YGB | Structure of vaccinia virus D13 scaffolding protein | x-ray diffraction | A, B, C | — | — |
| 2YGB | Structure of vaccinia virus D13 scaffolding protein | x-ray diffraction | A, B, C | — | — |
| 2YGC | Structure of vaccinia virus D13 scaffolding protein | x-ray diffraction | A, B, C | — | — |
| 2YGC | Structure of vaccinia virus D13 scaffolding protein | x-ray diffraction | A, B, C | — | — |
| 3SAM | Structure of D13, the scaffolding protein of vaccinia virus (mutant D513G) | x-ray diffraction | A, B, C | — | — |
| 3SAM | Structure of D13, the scaffolding protein of vaccinia virus (mutant D513G) | x-ray diffraction | A, B, C | — | — |
| 3SAQ | Structure of D13, the scaffolding protein of vaccinia virus | x-ray diffraction | A, B | — | — |
| 3SAQ | Structure of D13, the scaffolding protein of vaccinia virus | x-ray diffraction | A, B | — | — |
| 6BEB | Crystal structure of vacv D13 in complex with rifamycin sv | x-ray diffraction | A, B, C | RFV | — |
| 6BEC | Crystal structure of VACV D13 in complex with Rifabutin | x-ray diffraction | A, B, C | RBT | — |
| 6BEC | Crystal structure of vacv D13 in complex with rifabutin | x-ray diffraction | A, B, C | RBT | — |
| 6BED | Crystal structure of vacv D13 in complex with rifampicin | x-ray diffraction | A, B, C | RFP | — |
| 6BEE | Crystal structure of vacv D13 in complex with rifaximin | x-ray diffraction | A, B, C | RXM | — |
| 6BEF | Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV | x-ray diffraction | A, B, C | 3YI | 20 (best 0.84) |
| 6BEF | Crystal structure of vacv D13 in complex with 3-formyl rifamycin sv | x-ray diffraction | A, B, C | 3YI | — |
| 6BEG | Crystal structure of VACV D13 F486A mutant | x-ray diffraction | A, B, C | — | — |
| 6BEG | Crystal structure of vacv D13 F486A mutant | x-ray diffraction | A, B, C | — | — |
| 6BEH | Crystal structure of vacv D13 in complex with rifapentine | x-ray diffraction | A, B, C | RPT | — |
| 6BEI | Crystal structure of vacv D13 in its apo (unbound) form | x-ray diffraction | A, B, C | — | — |
| 7VFD | Cryo-EM structure of vaccinia virus scaffolding protein D13 | electron microscopy | A, B, C | — | — |
| 7VFE | Cryo-EM structure of vaccinia virus scaffolding protein D13 with N- terminal polyhistidine tag | electron microscopy | A, B, C | — | — |
| 7VFF | Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal 17 residue truncation | electron microscopy | A, B, C | — | 20 (best 0.84) |
| 7VFF | Cryo-EM structure of vaccinia virus scaffolding protein D13 with N- terminal 17 residue truncation | electron microscopy | A, B, C | — | — |
| 7VFG | Cryo-EM structure of vaccinia virus scaffolding protein D13 trimer doublet | electron microscopy | E, F, D, C, A, B | — | — |
| 7VFH | Cryo-EM structure of vaccinia virus scaffolding protein D13 trimer sextet | electron microscopy | A, B, C, D, E, F, G, H, I, L, J, K, N, O, M, Q, R, P | — | — |
| 8F47 | Crystal structure of VACV D13 in complex with STK69439 | x-ray diffraction | A, B, C | XDF | 20 (best 0.82) |
Ligands
- 3YI · (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-formyl-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16, 18,20,22-heptamethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate · in 2 records
- RBT · Rifabutin · in 2 records
- RFP · Rifampicin · in 1 record
- RFV · Rifamycin sv · in 1 record
- RPT · Rifapentine · in 1 record
- RXM · (2S,16Z,18E,20S,21S,22R,23R,24R,25S,26R,27S,28E)-5,6, 21,23-tetrahydroxy-27-methoxy-2,4,11,16,20,22,24,26-octamethyl-1,15-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)furo[2'',3'':7', 8']naphtho[1',2':4,5]imidazo[1,2-a]pyridin-25-yl acetate · in 1 record
- XDF · 6,8-dimethoxy-2-methylquinolin-4-amine · in 1 record
Elsewhere
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