UniProt P59807
Chondroitin sulfate ABC endolyase (P59807)
Chondroitin sulfate ABC endolyase (UniProt P59807), EC 4.2.2.20: 10 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 22 pockets. Binding sites, druggability and experiment against prediction (TM-score)…
- UniProt
- P59807
- Protein
- Chondroitin sulfate ABC endolyase
- EC
- 4.2.2.20
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 22 · 1 record with a druggable one
Structures
11 records of P59807 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1HN0 | Crystal structure of chondroitin ABC lyase I from proteus vulgaris at 1.9 ångströms resolution | x-ray diffraction | A | — | — |
| 1HN0 | Crystal structure of chondroitin ABC lyase I from proteus vulgaris at 1.9 ångströms resolution | x-ray diffraction | A | — | — |
| 7EIP | Crystal structure of ligand-free chondroitin ABC lyase I | x-ray diffraction | A | MG | — |
| 7EIQ | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 4S | x-ray diffraction | A | ASG, GCD, MG | 6 (best 0.47) |
| 7EIQ | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 4S | x-ray diffraction | A | ASG, GCD, MG | — |
| 7EIR | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 6S | x-ray diffraction | A | NG6, GCD, MG | 4 (best 0.53) |
| 7EIR | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 6S | x-ray diffraction | A | NG6, GCD, MG | — |
| 7EIS | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 0S | x-ray diffraction | A | NGA, GCD, MG | 6 (best 0.44) |
| 7EIS | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 0S | x-ray diffraction | A | NGA, GCD, MG | — |
| 7YKE | Crystal structure of chondroitin ABC lyase I in complex with chondroitin disaccharide 4,6-sulfate | x-ray diffraction | A | 8EX, GCD, MG | 6 (best 0.44) |
| P59807 | AlphaFold monomer V2.0 prediction for chondroitin sulfate ABC endolyase (P59807) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 8 records
- GCD · 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid · in 7 records
- ASG · 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose · in 2 records
- NG6 · 2-acetamido-2-deoxy-6-O-sulfo-beta-D-galactopyranose · in 2 records
- NGA · 2-acetamido-2-deoxy-beta-D-galactopyranose · in 2 records
- 8EX · 2-acetamido-2-deoxy-4,6-di-O-sulfo-beta-D-galactopyranose · in 1 record
Experiment against prediction
- 7EIP chain A against the predicted model P59807: TM-score 1.00, RMSD 0.46 Å
- 7YKE chain A against the predicted model P59807: TM-score 1.00, RMSD 0.48 Å
- 7EIQ chain A against the predicted model P59807: TM-score 1.00, RMSD 0.51 Å
- 7EIQ chain A against the predicted model P59807: TM-score 1.00, RMSD 0.51 Å
- 7EIR chain A against the predicted model P59807: TM-score 1.00, RMSD 0.59 Å
- 7EIR chain A against the predicted model P59807: TM-score 1.00, RMSD 0.59 Å
- 7EIS chain A against the predicted model P59807: TM-score 1.00, RMSD 0.60 Å
- 7EIS chain A against the predicted model P59807: TM-score 1.00, RMSD 0.60 Å
- 1HN0 chain A against the predicted model P59807: TM-score 1.00, RMSD 0.63 Å
- 1HN0 chain A against the predicted model P59807: TM-score 1.00, RMSD 0.63 Å
Elsewhere
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