UniProt P56060
2-dehydro-3-deoxyphosphooctonate aldolase (P56060)
2-dehydro-3-deoxyphosphooctonate aldolase (UniProt P56060): 8 experimental structures and 1 predicted model on GenesisL1, 2 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P56060
- Protein
- 2-dehydro-3-deoxyphosphooctonate aldolase
- Experimental structures
- 8
- Predicted models
- 1
- Pockets
- 2 · 1 record with a druggable one
Structures
9 records of P56060 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4Z1A | Structure of apo form KDO8PS from H.pylori | x-ray diffraction | A, B | — | — |
| 4Z1A | Structure of apo form KDO8PS from H.PYLORI | x-ray diffraction | A, B | — | — |
| 4Z1B | Structure of H204A mutant KDO8PS from H.pylori | x-ray diffraction | A, B | — | — |
| 4Z1B | Structure of H204A mutant KDO8PS from H.PYLORI | x-ray diffraction | A, B | — | — |
| 4Z1C | Structure of Cadmium bound KDO8PS from H.pylori | x-ray diffraction | A, B | — | — |
| 4Z1C | Structure of cadmium bound KDO8PS from H.PYLORI | x-ray diffraction | A, B | — | — |
| 4Z1D | Structure of PEP and zinc bound KDO8PS from H.pylori | x-ray diffraction | A, B | — | — |
| 4Z1D | Structure of pep and zinc bound KDO8PS from H.PYLORI | x-ray diffraction | A, B | — | — |
| P56060 | AlphaFold monomer V2.0 prediction for 2-dehydro-3-deoxyphosphooctonate aldolase (P56060) | predicted | A | — | 2 (best 0.67) |
Experiment against prediction
- 4Z1D chain A against the predicted model P56060: TM-score 0.99, RMSD 0.72 Å
- 4Z1D chain A against the predicted model P56060: TM-score 0.99, RMSD 0.72 Å
- 4Z1C chain A against the predicted model P56060: TM-score 0.99, RMSD 0.77 Å
- 4Z1C chain A against the predicted model P56060: TM-score 0.99, RMSD 0.77 Å
- 4Z1B chain A against the predicted model P56060: TM-score 0.99, RMSD 0.71 Å
- 4Z1B chain A against the predicted model P56060: TM-score 0.99, RMSD 0.71 Å
- 4Z1B chain B against the predicted model P56060: TM-score 0.98, RMSD 1.03 Å
- 4Z1B chain B against the predicted model P56060: TM-score 0.98, RMSD 1.03 Å
- 4Z1A chain A against the predicted model P56060: TM-score 0.98, RMSD 1.09 Å
- 4Z1A chain A against the predicted model P56060: TM-score 0.98, RMSD 1.09 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.