UniProt P53671
LIM domain kinase 2 (P53671)
LIM domain kinase 2 (UniProt P53671), EC 2.7.1.-, 2.7.11.1: 11 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 56 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P53671
- Protein
- LIM domain kinase 2
- EC
- 2.7.1.-, 2.7.11.1
- Experimental structures
- 11
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 56 · 9 records with a druggable one
Structures
12 records of P53671 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1X6A | Solution structures of the second LIM domain of human LIM-kinase 2 (LIMK2) | solution nmr | A | ZN | — |
| 1X6A | Solution structures of the second lim domain of human lim-kinase 2 (LIMK2) | solution nmr | A | ZN | — |
| 4TPT | Crystal Structure of the Human LIMK2 Kinase Domain In Complex With a Non-ATP Competitive Inhibitor | x-ray diffraction | A, B | 35H | 6 (best 0.83) |
| 4TPT | Crystal structure of the human LIMK2 kinase domain in complex with a non-ATP competitive inhibitor | x-ray diffraction | A, B | 35H | 6 (best 0.83) |
| 5NXD | LIM Domain Kinase 2 (LIMK2) In Complex With TH-300 | x-ray diffraction | A, B | 9D8 | 2 (best 0.88) |
| 5NXD | Lim domain kinase 2 (LIMK2) in complex with th-300 | x-ray diffraction | A, B | 9D8 | 2 (best 0.88) |
| 7QHG | LIM domain kinase 2 (LIMK2) in complex with TH-470 | x-ray diffraction | A, B | T3B | 3 (best 0.83) |
| 7QHG | Lim domain kinase 2 (LIMK2) in complex with th-470 | x-ray diffraction | A, B | T3B | 3 (best 0.83) |
| 8GI4 | Crystal structure of human LIMK2 PDZ domain | x-ray diffraction | A, B, C, D, E, F, G, H | — | 10 (best 0.75) |
| 8S3X | LIM Domain Kinase 2 (LIMK2) bound to compound 52 | x-ray diffraction | A, B, C, D | A1H41 | 12 (best 0.82) |
| 8WSW | The Crystal Structure of LIMK2a from Biortus | x-ray diffraction | A, B, C, D | LH0 | 12 (best 0.77) |
| P53671 | AlphaFold monomer V2.0 prediction for lim domain kinase 2 (P53671) | predicted | A | — | — |
Ligands
- 35H · N-{4-[(1S)-1,2-dihydroxyethyl]benzyl}-N-methyl-4-(phenylsulfamoyl)benzamide · in 2 records
- 9D8 · 4-[(3-chlorophenyl)sulfamoyl]-~{N}-(phenylmethyl)-~{N}-propyl-benzamide · in 2 records
- T3B · 2-(2-methylpropanoylamino)-~{N}-[2-[(phenylmethyl)-[4-(phenylsulfamoyl)phenyl]carbonyl-amino]ethyl]-1,3-thiazole-5-carboxamide · in 2 records
- ZN · Zinc ion · in 2 records
- A1H41 · 4-(5-cyclopropyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-~{N}-[3-(3-methoxyphenyl)phenyl]-3,6-dihydro-2~{H}-pyridine-1-carboxamide · in 1 record
- LH0 · ~{N}-[5-[2-[2,6-bis(chloranyl)phenyl]-5-[bis(fluoranyl)methyl]pyrazol-3-yl]-1,3-thiazol-2-yl]-2-methyl-propanamide · in 1 record
Experiment against prediction
- 5NXD chain A against the predicted model P53671: TM-score 0.93, RMSD 2.09 Å
- 5NXD chain A against the predicted model P53671: TM-score 0.93, RMSD 2.09 Å
- 8GI4 chain D against the predicted model P53671: TM-score 0.93, RMSD 1.34 Å
- 5NXD chain B against the predicted model P53671: TM-score 0.93, RMSD 2.00 Å
- 8GI4 chain C against the predicted model P53671: TM-score 0.93, RMSD 1.35 Å
- 8GI4 chain A against the predicted model P53671: TM-score 0.93, RMSD 1.36 Å
- 8GI4 chain H against the predicted model P53671: TM-score 0.93, RMSD 1.07 Å
- 7QHG chain A against the predicted model P53671: TM-score 0.92, RMSD 2.26 Å
- 7QHG chain A against the predicted model P53671: TM-score 0.92, RMSD 2.26 Å
- 4TPT chain B against the predicted model P53671: TM-score 0.91, RMSD 1.97 Å
Elsewhere
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