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UniProt P46777

60S ribosomal protein L5 (P46777)

60S ribosomal protein L5 (UniProt P46777): 57 experimental structures on GenesisL1, 3 ligands bound, 49 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.

UniProt
P46777
Protein
60S ribosomal protein L5
Experimental structures
57
Predicted models
0
Ligands
3
Pockets
49 · 41 records with a druggable one

Structures

57 records of P46777 in the MolNFT archive: 57 experimental, 0 predicted.

EntryTitleMethodChainsLigandsPockets
4UG0Structure of the human 80S ribosomeelectron microscopyLD——
4V6XStructure of the human 80S ribosomeelectron microscopyCD——
5LKSStructure-function insights reveal the human ribosome as a cancer target for antibioticselectron microscopyLDMG—
6IP8Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)electron microscopy1G——
6LQMCryo-EM structure of a pre-60S ribosomal subunit - state Celectron microscopyr——
6LSSCryo-EM structure of a pre-60S ribosomal subunit - state preAelectron microscopyr——
6LU8Cryo-EM structure of a human pre-60S ribosomal subunit - state Aelectron microscopyrMG2 (best 0.88)
6OLEHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAselectron microscopyF——
6OLFHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAselectron microscopyF—1 (best 0.87)
6OLIStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule…electron microscopyF——
6OM0Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE…electron microscopyF——
6OM7Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and…electron microscopyF—1 (best 0.87)
6XA1Structure of a drug-like compound stalled human translation termination complexelectron microscopyLDMG1 (best 0.87)
6Y6XTetracenomycin X bound to the human ribosomeelectron microscopyLDMG1 (best 0.88)
6Z6LCryo-EM structure of human CCDC124 bound to 80S ribosomeselectron microscopyLDMG1 (best 0.89)
6ZMOSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexelectron microscopyLDMG1 (best 0.87)
7OW7EIF6-bound large subunit of the human ribosomeelectron microscopyGBR1 (best 0.87)
7QVPHuman collided disome (di-ribosome) stalled on XBP1 mRNAelectron microscopyLD, MD——
7XNXHigh resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cellselectron microscopyLDMG1 (best 0.87)
7XNYHigh resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cellselectron microscopyLDMG1 (best 0.89)
8A3DHuman mature large subunit of the ribosome with eIF6 and homoharringtonine boundelectron microscopyGMG1 (best 0.89)
8BGUhuman MDM2-5S RNPelectron microscopyA—4 (best 0.80)
8FL0Human nucleolar pre-60S ribosomal subunit (State H)electron microscopySB—2 (best 0.86)
8FL2Human nuclear pre-60S ribosomal subunit (State I1)electron microscopySBMG1 (best 0.85)
8FL3Human nuclear pre-60S ribosomal subunit (State I2)electron microscopySBMG1 (best 0.88)
8FL4Human nuclear pre-60S ribosomal subunit (State I3)electron microscopySBMG1 (best 0.88)
8FL7Human nuclear pre-60S ribosomal subunit (State J2)electron microscopySB—1 (best 0.87)
8FL9Human nuclear pre-60S ribosomal subunit (State J3)electron microscopySB—1 (best 0.88)
8FLBHuman nuclear pre-60S ribosomal subunit (State K2)electron microscopySB——
8FLDHuman nuclear pre-60S ribosomal subunit (State L1)electron microscopySB——
8FLEHuman nuclear pre-60S ribosomal subunit (State L2)electron microscopySB——
8G5YmRNA decoding in human is kinetically and structurally distinct from bacteria (IC state)electron microscopyLDMG1 (best 0.88)
8G5ZmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)electron microscopyLDMG1 (best 0.87)
8G60mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)electron microscopyLDMG1 (best 0.87)
8G61mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)electron microscopyLDMG1 (best 0.89)
8GLPmRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU…electron microscopyLDMG1 (best 0.87)
8IDThuman nuclear pre-60S ribosomal particle - State Gelectron microscopyr—1 (best 0.87)
8IE3human nuclear pre-60S ribosomal particle - State Eelectron microscopyr——
8INFhuman nuclear pre-60S ribosomal particle - State F'electron microscopyr—1 (best 0.85)
8IR1human nuclear pre-60S ribosomal particle - State Aelectron microscopyC—1 (best 0.84)
8IR3human nuclear pre-60S ribosomal particle - State B'electron microscopyC——
8JDJStructure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)electron microscopyJ—1 (best 0.87)
8JDKStructure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)electron microscopyJ—1 (best 0.88)
8K2CCryo-EM structure of the human 80S ribosome with Tigecyclineelectron microscopyLDMG1 (best 0.87)
8OHD60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)electron microscopyLD—1 (best 0.88)
8OJ560S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)electron microscopyLD—2 (best 0.88)
8OJ860S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)electron microscopyLD—1 (best 0.85)
8QYXHuman 60S ribosomal subunitelectron microscopyG2—1 (best 0.88)
8UKBIn situ HHT and CHX treated human hibernating state without E-tRNA 80S ribosomeelectron microscopyLDMG1 (best 0.87)
8XSXCryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2electron microscopyLDMG2 (best 0.89)
8Y0Wdormant ribosome with eIF5A, eEF2 and SERBP1electron microscopyLD—2 (best 0.87)
8Y0XDormant ribosome with SERBP1electron microscopyLD—1 (best 0.87)
8YOPCryo-EM structure of the human 80S ribosome with 4 um Tigecyclineelectron microscopyLDMG1 (best 0.88)
9C3HStructure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.electron microscopyL8MG1 (best 0.89)
9G8Mhuman 80S ribosome bound by a SKI2-exosome complexelectron microscopyLD—1 (best 0.87)
9GMOeIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16electron microscopyGMG, GTP1 (best 0.88)
P46777AlphaFold monomer V2.0 prediction for 60S ribosomal protein L5 (P46777)———

Ligands

  • MG · Magnesium ion · in 23 records
  • BR · Bromide ion · in 1 record
  • GTP · Guanosine-5'-triphosphate · in 1 record

Elsewhere

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