UniProt P40700
Surface presentation of antigens protein SpaP (P40700)
Surface presentation of antigens protein SpaP (UniProt P40700): 7 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 72 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P40700
- Protein
- Surface presentation of antigens protein SpaP
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 72 · 8 records with a druggable one
Structures
8 records of P40700 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6PEP | Focussed refinement of InvGN0N1:SpaPQR:PrgIJ from the Salmonella SPI-1 injectisome needle complex | electron microscopy | 0, 1, 2, 3, 4 | — | 19 (best 0.88) |
| 6Q14 | Structure of the Salmonella SPI-1 injectisome NC-base | electron microscopy | 0, 1, 2, 3, 4 | — | 6 (best 0.89) |
| 6Q15 | Structure of the Salmonella SPI-1 injectisome needle complex | electron microscopy | 0, 1, 2, 3, 4 | — | 6 (best 0.88) |
| 6Q16 | Focussed refinement of InvGN0N1:PrgHK:SpaPQR:PrgIJ from Salmonella SPI-1 injectisome NC-base | electron microscopy | 0, 1, 2, 3, 4 | — | 8 (best 0.89) |
| 7AGX | Apo-state type 3 secretion system export apparatus complex from Salmonella enterica typhimurium | electron microscopy | 1A, 1B, 1C, 1D, 1E | — | 18 (best 0.87) |
| 7AH9 | Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium… | electron microscopy | 1A, 1B, 1C, 1D, 1E | 3PH | 5 (best 0.87) |
| 7AHI | Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium… | electron microscopy | 1A, 1B, 1C, 1D, 1E | 3PH | 7 (best 0.87) |
| P40700 | AlphaFold monomer V2.0 prediction for surface presentation of antigens protein spap (P40700) | predicted | A | — | 3 (best 0.51) |
Ligands
- 3PH · 1,2-diacyl-glycerol-3-sn-phosphate · in 2 records
Experiment against prediction
- 6Q14 chain 2 against the predicted model P40700: TM-score 0.89, RMSD 2.18 Å
- 6Q14 chain 4 against the predicted model P40700: TM-score 0.89, RMSD 2.32 Å
- 6Q14 chain 1 against the predicted model P40700: TM-score 0.89, RMSD 2.19 Å
- 6Q14 chain 3 against the predicted model P40700: TM-score 0.88, RMSD 2.31 Å
- 6Q14 chain 0 against the predicted model P40700: TM-score 0.88, RMSD 2.24 Å
- 7AGX chain 1E against the predicted model P40700: TM-score 0.85, RMSD 2.39 Å
- 7AGX chain 1B against the predicted model P40700: TM-score 0.85, RMSD 2.37 Å
- 7AGX chain 1D against the predicted model P40700: TM-score 0.84, RMSD 2.36 Å
- 6PEP chain 4 against the predicted model P40700: TM-score 0.84, RMSD 2.90 Å
- 6Q16 chain 4 against the predicted model P40700: TM-score 0.84, RMSD 2.90 Å
Elsewhere
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