UniProt P39286
Small ribosomal subunit biogenesis GTPase RsgA (P39286)
Small ribosomal subunit biogenesis GTPase RsgA (UniProt P39286), EC 3.6.1.-: 10 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 13 pockets. Binding sites, druggability and experiment against…
- UniProt
- P39286
- Protein
- Small ribosomal subunit biogenesis GTPase RsgA
- EC
- 3.6.1.-
- Experimental structures
- 10
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 13 · 3 records with a druggable one
Structures
11 records of P39286 in the MolNFT archive: 10 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5NO2 | RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate) | electron microscopy | Z | ZN, GNP, MG | — |
| 5NO2 | Rsga-gdpnp bound to the 30S ribosomal subunit (rsga assembly intermediate) | electron microscopy | Z | ZN, GNP, MG | — |
| 5NO3 | RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3) | electron microscopy | Z | ZN, GNP, MG | 2 (best 0.84) |
| 5NO3 | Rsga-gdpnp bound to the 30S ribosomal subunit (rsga assembly intermediate without US3) | electron microscopy | Z | ZN, GNP, MG | — |
| 5NO4 | RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) | electron microscopy | Z | ZN, GNP, MG | 2 (best 0.84) |
| 5NO4 | Rsga-gdpnp bound to the 30S ribosomal subunit (rsga assembly intermediate with US3) | electron microscopy | Z | ZN, GNP, MG | — |
| 5UZ4 | The cryo-EM structure of yjeq bound to the 30S subunit suggests a fidelity checkpoint function for… | electron microscopy | Z | ZN, GGM | — |
| 7BOI | Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of… | electron microscopy | W | ZN, GNP, MG | 3 (best 0.83) |
| 7BOI | Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of… | electron microscopy | W | ZN, GNP, MG | — |
| 7NAR | Complete bacterial 30S ribosomal subunit assembly complex state F (+RSGA)(CONSENSUS refinement) | electron microscopy | W | ZN, GNP, MG | — |
| P39286 | AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (P39286) | predicted | A | — | 6 (best 0.49) |
Ligands
Experiment against prediction
- 5NO3 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.31 Å
- 5NO3 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.31 Å
- 5NO4 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.32 Å
- 5NO4 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.32 Å
- 5NO2 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.32 Å
- 5NO2 chain Z against the predicted model P39286: TM-score 0.90, RMSD 2.32 Å
- 7BOI chain W against the predicted model P39286: TM-score 0.89, RMSD 2.63 Å
- 7BOI chain W against the predicted model P39286: TM-score 0.89, RMSD 2.63 Å
- 7NAR chain W against the predicted model P39286: TM-score 0.89, RMSD 2.63 Å
- 5UZ4 chain Z against the predicted model P39286: TM-score 0.88, RMSD 2.73 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.