UniProt P38351
RNA polymerase II-associated protein 1 (P38351)
RNA polymerase II-associated protein 1 (UniProt P38351): 3 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 2 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P38351
- Protein
- RNA polymerase II-associated protein 1
- Experimental structures
- 3
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 2 · 1 record with a druggable one
Structures
4 records of P38351 in the MolNFT archive: 3 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5ZYP | Structure of the yeast CTR9/PAF1 complex | x-ray diffraction | A | NI | — |
| 7DKH | Crystal structure of the Ctr9/Paf1/Cdc73/Rtf1 quaternary complex | x-ray diffraction | B, F, J | — | — |
| 7DKH | Crystal structure of the CTR9/PAF1/CDC73/RTF1 quaternary complex | x-ray diffraction | B, F, J | — | — |
| P38351 | AlphaFold monomer V2.0 prediction for RNA polymerase II-associated protein 1 (P38351) | predicted | A | — | 2 (best 0.51) |
Ligands
- NI · Nickel (II) ion · in 1 record
Experiment against prediction
- 5ZYP chain A against the predicted model P89105: TM-score 0.79, RMSD 2.00 Å
- 7DKH chain B against the predicted model P38351: TM-score 0.70, RMSD 3.00 Å
- 7DKH chain B against the predicted model P38351: TM-score 0.70, RMSD 3.00 Å
- 7DKH chain F against the predicted model P38351: TM-score 0.67, RMSD 3.20 Å
- 7DKH chain F against the predicted model P38351: TM-score 0.67, RMSD 3.20 Å
- 5ZYP chain A against the predicted model P38351: TM-score 0.20, RMSD 6.75 Å
Elsewhere
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