UniProt P37965
Glycerophosphoryl diester phosphodiesterase (P37965)
Glycerophosphoryl diester phosphodiesterase (UniProt P37965), EC 3.1.4.46: 5 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 2 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P37965
- Protein
- Glycerophosphoryl diester phosphodiesterase
- EC
- 3.1.4.46
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 2 · 0 records with a druggable one
Structures
6 records of P37965 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5T91 | Crystal structure of B. subtilis 168 glpq in complex with bicine | x-ray diffraction | A | CA, BCN, NA | — |
| 5T9B | Crystal structure of B. subtilis 168 GlpQ in complex with glycerol-3-phosphate (5 minute soak) | x-ray diffraction | G | CA, G3P, NA | 1 (best 0.39) |
| 5T9B | Crystal structure of B. subtilis 168 glpq in complex with glycerol-3- phosphate (5 minute soak) | x-ray diffraction | G | CA, G3P, NA | — |
| 5T9C | Crystal structure of B. subtilis 168 GlpQ in complex with glycerol-3-phosphate (1 hour soak) | x-ray diffraction | E | CA, G3P, PO4, NA | 1 (best 0.38) |
| 5T9C | Crystal structure of B. subtilis 168 glpq in complex with glycerol-3- phosphate (1 hour soak) | x-ray diffraction | E | CA, G3P, PO4, NA | — |
| P37965 | AlphaFold monomer V2.0 prediction for glycerophosphodiester phosphodiesterase (P37965) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5T9C chain E against the predicted model P37965: TM-score 1.00, RMSD 0.22 Å
- 5T9C chain E against the predicted model P37965: TM-score 1.00, RMSD 0.22 Å
- 5T9B chain G against the predicted model P37965: TM-score 0.99, RMSD 0.51 Å
- 5T9B chain G against the predicted model P37965: TM-score 0.99, RMSD 0.51 Å
- 5T91 chain A against the predicted model P37965: TM-score 0.99, RMSD 0.54 Å
Elsewhere
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