UniProt P37028
Vitamin B12-binding protein (P37028)
Vitamin B12-binding protein (UniProt P37028): 21 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 5 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P37028
- Protein
- Vitamin B12-binding protein
- Experimental structures
- 21
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 5 · 1 record with a druggable one
Structures
22 records of P37028 in the MolNFT archive: 21 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1N2Z | 2.0 Angstrom structure of BtuF, the vitamin B12 binding protein of E. coli | x-ray diffraction | A, B | — | — |
| 1N2Z | 2.0 ångström structure of btuf, the vitamin B12 binding protein of E. COLI | x-ray diffraction | A, B | — | — |
| 1N4A | The Ligand Bound Structure of E.coli BtuF, the Periplasmic Binding Protein for Vitamin B12 | x-ray diffraction | A, B | — | — |
| 1N4A | The ligand bound structure of E.COLI btuf, the periplasmic binding protein for vitamin B12 | x-ray diffraction | A, B | — | — |
| 1N4D | The Ligand-Free Structure of E coli BtuF, the Periplasmic Binding Protein for Vitamin B12 | x-ray diffraction | A, B | — | — |
| 1N4D | The ligand-free structure of E COLI btuf, the periplasmic binding protein for vitamin B12 | x-ray diffraction | A, B | — | — |
| 2QI9 | ABC-transporter BtuCD in complex with its periplasmic binding protein BtuF | x-ray diffraction | F | — | — |
| 2QI9 | ABC-transporter btucd in complex with its periplasmic binding protein btuf | x-ray diffraction | F | — | — |
| 4DBL | Crystal structure of E159Q mutant of BtuCDF | x-ray diffraction | E, J | — | — |
| 4DBL | Crystal structure of E159Q mutant of btucdf | x-ray diffraction | E, J | — | — |
| 4FI3 | Structure of vitamin B12 transporter BtuCD-F in a nucleotide-bound state | x-ray diffraction | F | — | — |
| 4FI3 | Structure of vitamin B12 transporter btucd-F in a nucleotide-bound state | x-ray diffraction | F | — | — |
| 5M29 | Structure of cobinamide-bound BtuF, the periplasmic vitamin B12 binding protein in E.coli | x-ray diffraction | A, B | CBY, CYN | — |
| 5M29 | Structure of cobinamide-bound btuf, the periplasmic vitamin B12 binding protein in E.COLI | x-ray diffraction | A, B | CBY, CYN | — |
| 5M2Q | Structure of cobinamide-bound BtuF mutant W66F, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CBY, CYN | — |
| 5M2Q | Structure of cobinamide-bound btuf mutant W66F, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CBY, CYN | — |
| 5M34 | Structure of cobinamide-bound BtuF mutant W66Y, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CBY, CYN | — |
| 5M34 | Structure of cobinamide-bound btuf mutant W66Y, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CBY, CYN | — |
| 5M3B | Structure of cobinamide-bound BtuF mutant W66L, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CYN, CBY | 5 (best 0.75) |
| 5M3B | Structure of cobinamide-bound btuf mutant W66L, the periplasmic vitamin B12 binding protein in… | x-ray diffraction | A, B | CYN, CBY | — |
| 5OVW | Nanobody-bound btuf, the vitamin B12 binding protein in escherichia COLI | x-ray diffraction | A, B, C, D, E, F | — | — |
| P37028 | AlphaFold monomer V2.0 prediction for vitamin B12-binding protein (P37028) | predicted | A | — | — |
Ligands
Experiment against prediction
- 1N2Z chain B against the predicted model P37028: TM-score 0.98, RMSD 0.83 Å
- 1N2Z chain B against the predicted model P37028: TM-score 0.98, RMSD 0.83 Å
- 5OVW chain A against the predicted model P37028: TM-score 0.98, RMSD 0.88 Å
- 1N2Z chain A against the predicted model P37028: TM-score 0.98, RMSD 0.86 Å
- 1N2Z chain A against the predicted model P37028: TM-score 0.98, RMSD 0.86 Å
- 5OVW chain C against the predicted model P37028: TM-score 0.98, RMSD 0.90 Å
- 5OVW chain B against the predicted model P37028: TM-score 0.98, RMSD 0.91 Å
- 5M29 chain B against the predicted model P37028: TM-score 0.98, RMSD 0.88 Å
- 5M29 chain B against the predicted model P37028: TM-score 0.98, RMSD 0.88 Å
- 5OVW chain F against the predicted model P37028: TM-score 0.98, RMSD 0.94 Å
Elsewhere
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