UniProt P35247
Pulmonary surfactant-associated protein D (P35247)
Pulmonary surfactant-associated protein D (UniProt P35247): 53 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P35247
- Protein
- Pulmonary surfactant-associated protein D
- Experimental structures
- 53
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 4 · 1 record with a druggable one
Structures
54 records of P35247 in the MolNFT archive: 53 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1B08 | Lung surfactant protein D (sp-D) (fragment) | x-ray diffraction | A, B, C | — | — |
| 1B08 | Lung surfactant protein D (sp-D) (fragment) | x-ray diffraction | A, B, C | — | — |
| 1M7L | Solution Structure of the Coiled-Coil Trimerization Domain from Lung Surfactant Protein D | solution nmr | A, B, C | — | — |
| 1M7L | Solution structure of the coiled-coil trimerization domain from lung surfactant protein D | solution nmr | A, B, C | — | — |
| 1PW9 | High resolution crystal structure of an active recombinant fragment of human lung surfactant… | x-ray diffraction | A, B, C | — | — |
| 1PW9 | High resolution crystal structure of an active recombinant fragment of human lung surfactant… | x-ray diffraction | A, B, C | — | — |
| 1PWB | High resolution crystal structure of an active recombinant fragment of human lung surfactant… | x-ray diffraction | A, B, C | — | — |
| 1PWB | High resolution crystal structure of an active recombinant fragment of human lung surfactant… | x-ray diffraction | A, B, C | — | — |
| 2GGU | crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2GGU | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2GGX | Crystal structure of the trimer neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2GGX | Crystal structure of the trimer neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2ORJ | crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2ORJ | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2ORK | crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2ORK | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2OS9 | crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2OS9 | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIA | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIA | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIB | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIB | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIC | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIC | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RID | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RID | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIE | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 2RIE | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 3DBZ | human surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3DBZ | Human surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3G81 | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 3G81 | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 3G83 | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 3G83 | Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant… | x-ray diffraction | A, B, C | — | — |
| 3G84 | Crystal structure of the trimeric neck and carbohydrate recognition domain of R343V mutant of human… | x-ray diffraction | A, B, C | — | — |
| 3G84 | Crystal structure of the trimeric neck and carbohydrate recognition domain of R343V mutant of human… | x-ray diffraction | A, B, C | — | — |
| 3IKN | Crystal structure of galactose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKN | Crystal structure of galactose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKP | Crystal structure of inositol phosphate bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKP | Crystal structure of inositol phosphate bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKQ | Crystal structure of alpha 1-2 mannobiose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKQ | Crystal structure of alpha 1-2 mannobiose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKR | Crystal structure of alpha 1-4 mannobiose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 3IKR | Crystal structure of alpha 1-4 mannobiose bound trimeric human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 4E52 | Crystal structure of Haemophilus Eagan 4A polysaccharide bound human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 4E52 | Crystal structure of haemophilus eagan 4A polysaccharide bound human lung surfactant protein D | x-ray diffraction | A, B, C | — | — |
| 4M17 | Crystal Structure of Surfactant Protein-D D325A/R343V mutant | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 4M17 | Crystal structure of surfactant protein-D D325A/R343V mutant | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 4M18 | Crystal Structure of Surfactant Protein-D D325A/R343V mutant in complex with trimannose… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 4M18 | Crystal structure of surfactant protein-D D325A/R343V mutant in complex with trimannose… | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 5OXR | Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand Salmonella… | x-ray diffraction | A, B, C | K5B, GMH, CA | 4 (best 0.57) |
| 5OXR | Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand salmonella… | x-ray diffraction | A, B, C | K5B, GMH, CA | — |
| 5OXS | Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand salmonella… | x-ray diffraction | A, B, C | GMH, GLC, K5B, CA | — |
| P35247 | AlphaFold monomer V2.0 prediction for pulmonary surfactant-associated protein D (P35247) | predicted | A | — | — |
Ligands
Experiment against prediction
- 2RIA chain A against the predicted model P35247: TM-score 1.00, RMSD 0.28 Å
- 2RIA chain A against the predicted model P35247: TM-score 1.00, RMSD 0.28 Å
- 3IKQ chain C against the predicted model P35247: TM-score 1.00, RMSD 0.30 Å
- 3IKQ chain C against the predicted model P35247: TM-score 1.00, RMSD 0.30 Å
- 2RIE chain B against the predicted model P35247: TM-score 1.00, RMSD 0.31 Å
- 2RIE chain B against the predicted model P35247: TM-score 1.00, RMSD 0.31 Å
- 2RIE chain A against the predicted model P35247: TM-score 1.00, RMSD 0.31 Å
- 2RIE chain A against the predicted model P35247: TM-score 1.00, RMSD 0.31 Å
- 5OXR chain B against the predicted model P35247: TM-score 0.99, RMSD 0.37 Å
- 4M17 chain F against the predicted model P35247: TM-score 0.99, RMSD 0.36 Å
Elsewhere
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