UniProt P28481
synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II, (P28481)
synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II, (UniProt P28481): 8 experimental structures and 1…
- UniProt
- P28481
- Protein
- synthetic peptide containing the CII583-591 epitope of collagen type…
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 9 · 2 records with a druggable one
Structures
9 records of P28481 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5MU0 | ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (IA03) | x-ray diffraction | Q, R, S, T, U, V, W, X | — | — |
| 5MU0 | ACC1 Fab fragment in complex with citrullinated C1 epitope of cii (IA03) | x-ray diffraction | Q, R, S, T, U, V, W, X | CIR | — |
| 5MUB | ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (CG05) | x-ray diffraction | X, E, H, K, N, Q, T, W | — | — |
| 5MUB | ACC1 Fab fragment in complex with citrullinated C1 epitope of cii (CG05) | x-ray diffraction | X, E, H, K, N, Q, T, W | CIR | — |
| 5MV3 | ACC1 Fab fragment in complex with CII583-591 (CG10) | x-ray diffraction | X, E, H, K, N, Q, T, W | — | 4 (best 0.76) |
| 5MV3 | ACC1 Fab fragment in complex with CII583-591 (CG10) | x-ray diffraction | X, E, H, K, N, Q, T, W | — | — |
| 5MV4 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | x-ray diffraction | X, E, H, K, N, Q, T, W | SO4 | 5 (best 0.80) |
| 5MV4 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (PTM23) | x-ray diffraction | X, E, H, K, N, Q, T, W | SO4 | — |
| P28481 | AlphaFold monomer V2.0 prediction for collagen alpha-1(II) chain (P28481) | predicted | A | — | — |
Ligands
Experiment against prediction
- 5MUB chain Q against the predicted model P28481: TM-score 0.62, RMSD 0.61 Å
- 5MUB chain Q against the predicted model P28481: TM-score 0.55, RMSD 1.62 Å
- 5MUB chain H against the predicted model P28481: TM-score 0.48, RMSD 0.89 Å
- 5MUB chain E against the predicted model P28481: TM-score 0.47, RMSD 0.74 Å
- 5MUB chain W against the predicted model P28481: TM-score 0.46, RMSD 0.86 Å
- 5MUB chain N against the predicted model P28481: TM-score 0.45, RMSD 0.97 Å
- 5MU0 chain S against the predicted model P28481: TM-score 0.44, RMSD 0.85 Å
- 5MU0 chain W against the predicted model P28481: TM-score 0.44, RMSD 0.36 Å
- 5MU0 chain V against the predicted model P28481: TM-score 0.43, RMSD 0.71 Å
- 5MU0 chain T against the predicted model P28481: TM-score 0.42, RMSD 0.79 Å
Elsewhere
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