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Ligand · HYP

HYP · 4-hydroxyproline

HYP, 4-hydroxyproline (C5 H9 N O3, 131.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
HYP
Formula
C5 H9 N O3
Class
ligand
Structures
2
PDB entries
2

Binding sites

HYP in 2 structures; the first of them:

  • 5NHC · Crystal structure of xylose isomerase from Piromyces E2 in complex with two Co2+ ions and… · HYP A504 · binds LYS265, ALA287, VAL288, GLY291, MET292, LEU293, GLY329, GLY331 and 2 more
  • 8H81 · Trans-3/4-proline-hydroxylase H11 with 4-Hydroxyl-proline · HYP A301 · binds GLN97, LYS99, HIS114, ASP116, PHE119, TRP120, THR172, LEU173 and 3 more

Residues it binds most

GLY 4, VAL 4, LEU 5, LYS 5, PHE 5, ALA 4, MET 4, HIS 1, ARG 1, ASP 1 (residue and the binding sites it lines).

Found with

  • XUL · D-xylulose
  • CO · Cobalt (II) ion

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