UniProt P26908
50S ribosomal protein L21 (P26908)
50S ribosomal protein L21 (UniProt P26908): 33 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 35 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P26908
- Protein
- 50S ribosomal protein L21
- Experimental structures
- 33
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 35 · 15 records with a druggable one
Structures
34 records of P26908 in the MolNFT archive: 33 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3J3V | Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a) | electron microscopy | R | — | — |
| 3J3V | Atomic model of the immature 50S subunit from bacillus subtilis (state I-a) | electron microscopy | R | — | — |
| 3J3W | Atomic model of the immature 50S subunit from Bacillus subtilis (state II-a) | electron microscopy | R | — | — |
| 3J3W | Atomic model of the immature 50S subunit from bacillus subtilis (state II-a) | electron microscopy | R | — | — |
| 3J9W | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | electron microscopy | BU | — | — |
| 5NJT | Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization. | electron microscopy | k | — | — |
| 6HA1 | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in… | electron microscopy | R | — | — |
| 6HA8 | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | electron microscopy | R | — | — |
| 6HTQ | Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome | electron microscopy | R | — | — |
| 6TNN | Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA | electron microscopy | k | — | 2 (best 0.89) |
| 6TNN | Mini-RNase III (mini-III) bound to 50S ribosome with precursor 23S rRNA | electron microscopy | k | — | — |
| 6TPQ | RNase M5 bound to 50S ribosome with precursor 5S rRNA | electron microscopy | k | MG | 2 (best 0.89) |
| 6TPQ | RNase M5 bound to 50S ribosome with precursor 5S rRNA | electron microscopy | k | — | — |
| 7AQC | Structure of the bacterial rqc complex (decoding state) | electron microscopy | g | — | — |
| 7AQD | Structure of the bacterial RQC complex (Translocating State) | electron microscopy | g | — | 3 (best 0.89) |
| 7AQD | Structure of the bacterial rqc complex (translocating state) | electron microscopy | g | — | — |
| 7AS8 | Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA… | electron microscopy | V | — | 2 (best 0.86) |
| 7AS8 | Bacillus subtilis ribosome quality control complex state B. ribosomal 50S subunit with P-tRNA… | electron microscopy | V | — | — |
| 7AS9 | Bacillus subtilis ribosome-associated quality control complex state a. ribosomal 50S subunit with… | electron microscopy | V | — | — |
| 7O5B | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with… | electron microscopy | o | — | 2 (best 0.87) |
| 7OPE | RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement) | electron microscopy | V | — | 4 (best 0.84) |
| 7OPE | Rqch dr variant bound to 50S-peptidyl-tRNA-rqcp rqc complex (rigid body refinement) | electron microscopy | V | — | — |
| 7QV1 | Bacillus subtilis collided disome (Leading 70S) | electron microscopy | R | — | 2 (best 0.87) |
| 7QV2 | Bacillus subtilis collided disome (Collided 70S) | electron microscopy | R | — | — |
| 7QV3 | Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) | electron microscopy | R | — | 2 (best 0.87) |
| 7SAE | 44SR70P Class1 ribosomal particle | electron microscopy | R | — | 2 (best 0.86) |
| 7SAE | 44SR70P CLASS1 ribosomal particle | electron microscopy | R | — | — |
| 8BUU | ARE-ABCF VmlR2 bound to a 70S ribosome | electron microscopy | R | — | 2 (best 0.86) |
| 8S1P | YlmH bound to PtRNA-50S | electron microscopy | R | MG | 2 (best 0.88) |
| 8S1U | YlmH bound to stalled 50S subunits with RqcH and PtRNA | electron microscopy | R | — | 3 (best 0.88) |
| 9BS0 | YphC-treated 45SYphC particle. Class 5 | electron microscopy | M | — | 3 (best 0.88) |
| 9BSL | 45SRbgA particle in complex with RbgA and YphC. Class A | electron microscopy | M | — | 2 (best 0.87) |
| 9BSS | 45SRbgA particle in complex with RbgA and YphC. Class B | electron microscopy | M | — | 2 (best 0.85) |
| P26908 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L21 (P26908) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 2 records
Experiment against prediction
- 8BUU chain R against the predicted model P26908: TM-score 0.98, RMSD 0.50 Å
- 8S1U chain R against the predicted model P26908: TM-score 0.98, RMSD 0.53 Å
- 8S1P chain R against the predicted model P26908: TM-score 0.98, RMSD 0.53 Å
- 7SAE chain R against the predicted model P26908: TM-score 0.98, RMSD 0.58 Å
- 7SAE chain R against the predicted model P26908: TM-score 0.98, RMSD 0.58 Å
- 9BSL chain M against the predicted model P26908: TM-score 0.97, RMSD 0.63 Å
- 9BSS chain M against the predicted model P26908: TM-score 0.97, RMSD 0.63 Å
- 7AS8 chain V against the predicted model P26908: TM-score 0.96, RMSD 0.74 Å
- 7AS8 chain V against the predicted model P26908: TM-score 0.96, RMSD 0.74 Å
- 7OPE chain V against the predicted model P26908: TM-score 0.96, RMSD 0.74 Å
Elsewhere
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