UniProt P22413
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 (P22413)
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 (UniProt P22413), EC 3.1.4.1, 3.6.1.9: 7 experimental structures and 1 predicted model on GenesisL1, 8 ligands bound, 100 pockets. Binding sites, druggability and…
- UniProt
- P22413
- Protein
- Ectonucleotide pyrophosphatase/phosphodiesterase family member 1
- EC
- 3.1.4.1, 3.6.1.9
- Experimental structures
- 7
- Predicted models
- 1
- Ligands
- 8
- Pockets
- 100 · 5 records with a druggable one
Structures
8 records of P22413 in the MolNFT archive: 7 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2YS0 | Solution structure of the Somatomedin B domain of human Ectonucleotide… | solution nmr | A | — | — |
| 2YS0 | Solution structure of the somatomedin B domain of human ectonucleotide… | solution nmr | A | — | — |
| 6WET | Crystal structures of human E-NPP 1: apo | x-ray diffraction | AaA, BaB | NAG, ZN | 20 (best 0.72) |
| 6WEU | Crystal structures of human E-NPP 1: bound to adenosine-5'-thio-monophosphate | x-ray diffraction | AbA, BbB | NAG, ZN, SRA | 20 (best 0.69) |
| 6WEV | Crystal structures of human E-NPP 1: bound to N-{[1-(6,7-dimethoxy-5,8-dihydroquinazolin-4-yl)piperi… | x-ray diffraction | AbA, BbB | NAG, ZN, CA, TZS, PO4 | 20 (best 0.69) |
| 6WEW | Crystal structures of human E-NPP 1: bound to N-{4-[(7-methoxyquinolin-4-yl)oxy]phenyl}sulfuric… | x-ray diffraction | AbA, BaB | NAG, PO4, ZN, TZV | 20 (best 0.70) |
| 8GHR | Structure of human ENPP1 in complex with variable heavy domain VH27.2 | electron microscopy | A, B | NAG, ZN, AMP, CA | 20 (best 0.83) |
| P22413 | AlphaFold monomer V2.0 prediction for ectonucleotide PYROPHOSPHATASE/PHOSPHODIESTERASE family… | predicted | A | — | — |
Ligands
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 5 records
- ZN · Zinc ion · in 5 records
- CA · Calcium ion · in 2 records
- PO4 · Phosphate ion · in 2 records
- AMP · Adenosine monophosphate · in 1 record
- SRA · Adenosine -5'-thio-monophosphate · in 1 record
- TZS · N-{[1-(6,7-dimethoxy-5,8-dihydroquinazolin-4-yl)piperidin-4-yl]methyl}sulfuric diamide · in 1 record
- TZV · N-{4-[(7-methoxyquinolin-4-yl)oxy]phenyl}sulfuric diamide · in 1 record
Experiment against prediction
- 6WEV chain AbA against the predicted model P22413: TM-score 1.00, RMSD 0.39 Å
- 6WEW chain AbA against the predicted model P22413: TM-score 1.00, RMSD 0.39 Å
- 6WEU chain AbA against the predicted model P22413: TM-score 1.00, RMSD 0.45 Å
- 6WET chain AaA against the predicted model P22413: TM-score 1.00, RMSD 0.45 Å
- 6WEW chain BaB against the predicted model P22413: TM-score 1.00, RMSD 0.53 Å
- 6WEV chain BbB against the predicted model P22413: TM-score 1.00, RMSD 0.57 Å
- 6WEU chain BbB against the predicted model P22413: TM-score 1.00, RMSD 0.58 Å
- 6WET chain BaB against the predicted model P22413: TM-score 1.00, RMSD 0.56 Å
- 8GHR chain A against the predicted model P22413: TM-score 0.99, RMSD 1.11 Å
- 8GHR chain B against the predicted model P22413: TM-score 0.99, RMSD 1.11 Å
Elsewhere
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