UniProt P17998
Colicin-D (P17998)
Colicin-D (UniProt P17998): 8 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 10 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P17998
- Protein
- Colicin-D
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 10 · 1 record with a druggable one
Structures
9 records of P17998 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1TFK | Ribonuclease from Escherichia coli complexed with its inhibtor protein | x-ray diffraction | A | — | — |
| 1TFK | Ribonuclease from escherichia COLI complexed with its inhibtor protein | x-ray diffraction | A | — | — |
| 1TFO | Ribonuclease from Escherichia coli complexed with its inhibitor protein | x-ray diffraction | A | — | — |
| 1TFO | Ribonuclease from escherichia COLI complexed with its inhibitor protein | x-ray diffraction | A | — | — |
| 1V74 | Structure of the E. coli colicin D bound to its immunity protein ImmD | x-ray diffraction | A | — | — |
| 1V74 | Structure of the E. COLI colicin D bound to its immunity protein immd | x-ray diffraction | A | — | — |
| 5ZNM | Colicin D Central Domain and C-terminal tRNase domain | x-ray diffraction | A, B | SO4 | 10 (best 0.79) |
| 5ZNM | Colicin D central domain and C-terminal trnase domain | x-ray diffraction | A, B | SO4 | — |
| P17998 | AlphaFold monomer V2.0 prediction for colicin-D (P17998) | predicted | A | — | — |
Ligands
- SO4 · Sulfate ion · in 2 records
Experiment against prediction
- 5ZNM chain A against the predicted model P17998: TM-score 0.99, RMSD 0.58 Å
- 5ZNM chain A against the predicted model P17998: TM-score 0.99, RMSD 0.58 Å
- 5ZNM chain B against the predicted model P17998: TM-score 0.99, RMSD 0.63 Å
- 5ZNM chain B against the predicted model P17998: TM-score 0.99, RMSD 0.63 Å
- 1TFK chain A against the predicted model P17998: TM-score 0.99, RMSD 0.40 Å
- 1TFK chain A against the predicted model P17998: TM-score 0.99, RMSD 0.40 Å
- 1TFO chain A against the predicted model P17998: TM-score 0.98, RMSD 0.57 Å
- 1TFO chain A against the predicted model P17998: TM-score 0.98, RMSD 0.57 Å
- 1V74 chain A against the predicted model P17998: TM-score 0.97, RMSD 0.76 Å
- 1V74 chain A against the predicted model P17998: TM-score 0.97, RMSD 0.76 Å
Elsewhere
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