UniProt P12851
D-xylose isomerase (P12851)
D-xylose isomerase (UniProt P12851), EC 5.3.1.5: 27 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 48 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P12851
- Protein
- D-xylose isomerase
- EC
- 5.3.1.5
- Experimental structures
- 27
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 48 · 4 records with a druggable one
Structures
28 records of P12851 in the MolNFT archive: 27 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1BHW | Low temperature middle resolution structure of xylose isomerase from masc data | x-ray diffraction | A, B, C, D | — | — |
| 1BHW | Low temperature middle resolution structure of xylose isomerase from masc data | x-ray diffraction | A, B, C, D | — | — |
| 1XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 1XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 1XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 1XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 2XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 2XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 2XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 2XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 3XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 3XIM | Arginine residues as stabilizing elements in proteins | x-ray diffraction | A, B, C, D | — | — |
| 3XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 3XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 4XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 4XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 5XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | SOR, MG | — |
| 5XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | SOR, MG | — |
| 5XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | 16 (best 0.84) |
| 5XIN | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | — |
| 6XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | — |
| 6XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | — |
| 7XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | — | — |
| 8XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | 15 (best 0.83) |
| 8XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MG | — |
| 9XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MN | 14 (best 0.84) |
| 9XIM | Protein engineering of xylose (glucose) isomerase from actinoplanes missouriensis. 1.… | x-ray diffraction | A, B, C, D | XLS, MN | — |
| P12851 | AlphaFold monomer V2.0 prediction for xylose isomerase (P12851) | predicted | A | — | 3 (best 0.63) |
Ligands
Experiment against prediction
- 2XIM chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 2XIM chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 5XIN chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 5XIN chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 5XIN chain D against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 8XIM chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 8XIM chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 3XIN chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 3XIN chain A against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
- 8XIM chain D against the predicted model P12851: TM-score 1.00, RMSD 0.18 Å
Elsewhere
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