UniProt P12241
Photosystem II reaction center protein L (P12241)
Photosystem II reaction center protein L (UniProt P12241): 61 experimental structures and 1 predicted model on GenesisL1, 8 ligands bound, 50 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P12241
- Protein
- Photosystem II reaction center protein L
- Experimental structures
- 61
- Predicted models
- 1
- Ligands
- 8
- Pockets
- 50 · 25 records with a druggable one
Structures
62 records of P12241 in the MolNFT archive: 61 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3A0B | Crystal structure of Br-substituted Photosystem II complex | x-ray diffraction | L, l | — | — |
| 3A0B | Crystal structure of br-substituted photosystem II complex | x-ray diffraction | L, l | — | — |
| 3A0H | Crystal structure of I-substituted Photosystem II complex | x-ray diffraction | L, l | — | — |
| 3A0H | Crystal structure of I-substituted photosystem II complex | x-ray diffraction | L, l | — | — |
| 3WU2 | Crystal structure analysis of Photosystem II complex | x-ray diffraction | L, l | — | — |
| 3WU2 | Crystal structure analysis of photosystem II complex | x-ray diffraction | L, l | — | — |
| 4IL6 | Structure of Sr-substituted photosystem II | x-ray diffraction | L, l | — | — |
| 4IL6 | Structure of sr-substituted photosystem II | x-ray diffraction | L, l | — | — |
| 4UB6 | Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser | x-ray diffraction | L, l | — | — |
| 4UB6 | Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser | x-ray diffraction | L, l | — | — |
| 4UB8 | Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser | x-ray diffraction | L, l | — | — |
| 4UB8 | Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser | x-ray diffraction | L, l | — | — |
| 5B5E | Crystal structure analysis of photosystem II complex | x-ray diffraction | L, l | — | — |
| 5B66 | Crystal structure analysis of photosystem II complex | x-ray diffraction | L, l | — | — |
| 5GTH | Native XFEL structure of photosystem II (dark dataset) | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9 | 2 (best 0.83) |
| 5GTH | Native xfel structure of photosystem II (dark dataset) | x-ray diffraction | L, l | — | — |
| 5GTI | Native XFEL structure of photosystem II (two flash dataset) | x-ray diffraction | L, l | LHG, CLA, SQD, LMG, PL9 | 2 (best 0.81) |
| 5GTI | Native xfel structure of photosystem II (two flash dataset) | x-ray diffraction | L, l | — | — |
| 5V2C | Re-refinement of crystal structure of photosystem II complex | x-ray diffraction | L, l | CLA, LMG, LHG, PL9, SQD | 3 (best 0.82) |
| 5V2C | Re-refinement of crystal structure of photosystem II complex | x-ray diffraction | L, l | CLA, LMG, LHG, PL9, SQD | — |
| 5WS5 | Native XFEL structure of photosystem II (preflash dark dataset) | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG | 2 (best 0.82) |
| 5WS5 | Native xfel structure of photosystem II (preflash dark dataset) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG | — |
| 5WS6 | Native xfel structure of photosystem II (preflash two-flash dataset | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG | — |
| 6JLJ | Xfel structure of cyanobacterial photosystem II (dark state, DATASET1) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG | — |
| 6JLK | Xfel structure of cyanobacterial photosystem II (1F state, DATASET1) | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG | — |
| 6JLL | XFEL structure of cyanobacterial photosystem II (2F state, dataset1) | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG | 2 (best 0.83) |
| 6JLL | Xfel structure of cyanobacterial photosystem II (2F state, DATASET1) | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG | — |
| 6JLM | XFEL structure of cyanobacterial photosystem II (dark state, dataset2) | x-ray diffraction | L, l | CLA, SQD, LMG, LHG, PL9, UNL | 2 (best 0.83) |
| 6JLM | Xfel structure of cyanobacterial photosystem II (dark state, DATASET2) | x-ray diffraction | L, l | CLA, SQD, LMG, LHG, PL9 | — |
| 6JLN | Xfel structure of cyanobacterial photosystem II (1F state, DATASET2) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG | — |
| 6JLO | Xfel structure of cyanobacterial photosystem II (2F state, DATASET2) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG | — |
| 6JLP | XFEL structure of cyanobacterial photosystem II (3F state, dataset2) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG, UNL | 2 (best 0.83) |
| 6JLP | Xfel structure of cyanobacterial photosystem II (3F state, DATASET2) | x-ray diffraction | L, l | CLA, SQD, PL9, LHG, LMG | — |
| 7CJI | Photosystem II structure in the S1 state | x-ray diffraction | L, l | LHG, CLA, SQD, PL9, LMG, UNL | — |
| 7CJJ | Photosystem II structure in the S2 state | x-ray diffraction | L, l | CLA, LHG, SQD, PL9, LMG, UNL | 2 (best 0.83) |
| 7CJJ | Photosystem II structure in the S2 state | x-ray diffraction | L, l | LHG, CLA, SQD, PL9, LMG, UNL | — |
| 7COU | Structure of cyanobacterial photosystem II in the dark S1 state | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.82) |
| 7COU | Structure of cyanobacterial photosystem II in the dark S1 state | x-ray diffraction | L, l | LHG, CLA, SQD, LMG, PL9, UNL | — |
| 7CZL | Structural insights into a dimeric PSB27-photosystem II complex from a cyanobacterium… | electron microscopy | L, l | MGE, CLA, PQ9, SQD | — |
| 7D1T | Cryo-EM Structure of PSII at 1.95 angstrom resolution | electron microscopy | L, l | CLA, SQD, LMG, PL9, LHG | — |
| 7D1T | Cryo-EM structure of psii at 1.95 ångström resolution | electron microscopy | L, l | CLA, SQD, LMG, PL9, LHG | — |
| 7D1U | Cryo-EM structure of psii at 2.08 ångström resolution | electron microscopy | L, l | CLA, LMG, LHG, PL9, SQD | — |
| 7DXA | PSII intermediate Psb28-RC47 | electron microscopy | l | CLA, MGE, PQ9, SQD | 3 (best 0.84) |
| 7DXA | Psii intermediate PSB28-RC47 | electron microscopy | l | CLA, MGE, PQ9, SQD | — |
| 7DXH | Cryo-EM structure of PSII intermediate Psb28-PSII complex | electron microscopy | l | MGE, CLA, PQ9, SQD | 2 (best 0.74) |
| 7DXH | Cryo-EM structure of psii intermediate PSB28-psii complex | electron microscopy | l | MGE, CLA, PQ9, SQD | — |
| 7EDA | Structure of monomeric photosystem II | electron microscopy | L | CLA, LMG, PL9, LHG | — |
| 8GN1 | Crystal structure of DBBQ-bound photosystem II complex | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG, UNL | 2 (best 0.83) |
| 8GN2 | Crystal structure of PPBQ-bound photosystem II complex | x-ray diffraction | L, l | CLA, LMG, UNL, LHG, PL9, SQD | 2 (best 0.83) |
| 8IR5 | XFEL structure of cyanobacterial photosystem II under dark conditions | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.79) |
| 8IR6 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay | x-ray diffraction | L, l | CLA, LHG, LMG, PL9, SQD, UNL | 1 (best 0.78) |
| 8IR7 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.81) |
| 8IR8 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 1-microsecond delay | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.81) |
| 8IR9 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay | x-ray diffraction | L, l | CLA, LHG, LMG, PL9, SQD, UNL | 1 (best 0.79) |
| 8IRA | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-microsecond… | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.81) |
| 8IRB | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.83) |
| 8IRC | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay… | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG, UNL | 2 (best 0.83) |
| 8IRD | XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 20-nanosecond… | x-ray diffraction | L, l | CLA, LHG, LMG, PL9, SQD, UNL | 2 (best 0.82) |
| 8IRE | XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-nanosecond… | x-ray diffraction | L, l | CLA, SQD, LMG, PL9, LHG, UNL | 2 (best 0.82) |
| 8IRF | XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 1-microsecond… | x-ray diffraction | L, l | CLA, LHG, SQD, LMG, PL9, UNL | 2 (best 0.82) |
2 records more on the page itself.
Ligands
- CLA · Chlorophyll A · in 45 records
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 44 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 40 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 40 records
- PL9 · 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2, 6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone · in 40 records
- UNL · Unknown ligand · in 21 records
- MGE · (1S)-2-(alpha-L-allopyranosyloxy)-1-[(tridecanoyloxy) methyl]ethyl palmitate · in 5 records
- PQ9 · 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18,22,26-heptaenyl]-2,3-dimethylbenzo-1,4-quinone · in 5 records
Experiment against prediction
- 5WS5 chain L against the predicted model P12241: TM-score 0.88, RMSD 0.63 Å
- 5WS5 chain L against the predicted model P12241: TM-score 0.88, RMSD 0.63 Å
- 7CJJ chain l against the predicted model P12241: TM-score 0.87, RMSD 0.66 Å
- 5WS6 chain L against the predicted model P12241: TM-score 0.87, RMSD 0.65 Å
- 5WS5 chain l against the predicted model P12241: TM-score 0.87, RMSD 0.65 Å
- 8IRB chain l against the predicted model P12241: TM-score 0.87, RMSD 0.67 Å
- 5GTI chain L against the predicted model P12241: TM-score 0.87, RMSD 0.66 Å
- 5GTI chain L against the predicted model P12241: TM-score 0.87, RMSD 0.66 Å
- 5GTI chain l against the predicted model P12241: TM-score 0.87, RMSD 0.67 Å
- 8IR6 chain l against the predicted model P12241: TM-score 0.87, RMSD 0.67 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.