UniProt P0A9J6
Ribokinase (P0A9J6)
Ribokinase (UniProt P0A9J6), EC 2.7.1.15: 8 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 17 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0A9J6
- Protein
- Ribokinase
- EC
- 2.7.1.15
- Experimental structures
- 8
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 17 · 5 records with a druggable one
Structures
9 records of P0A9J6 in the MolNFT archive: 8 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1RK2 | E. COLI ribokinase complexed with ribose and ADP, solved in space group P212121 | x-ray diffraction | A, B, C, D | RIB, ALF, MG, ADP | 10 (best 0.76) |
| 1RK2 | E. COLI ribokinase complexed with ribose and ADP, solved in space group P212121 | x-ray diffraction | A, B, C, D | — | — |
| 1RKA | The apo form of E. COLI ribokinase | x-ray diffraction | A | — | 3 (best 0.61) |
| 1RKA | The apo form of E. COLI ribokinase | x-ray diffraction | A | — | — |
| 1RKD | E. COLI ribokinase complexed with ribose and ADP | x-ray diffraction | A | RIB, PO4, ADP | 1 (best 0.69) |
| 1RKD | E. COLI ribokinase complexed with ribose and ADP | x-ray diffraction | A | — | — |
| 1RKS | E. COLI ribokinase in complex with D-ribose | x-ray diffraction | A | RIB, PO4 | 1 (best 0.69) |
| 1RKS | E. COLI ribokinase in complex with D-ribose | x-ray diffraction | A | — | — |
| P0A9J6 | AlphaFold monomer V2.0 prediction for ribokinase (P0A9J6) | predicted | A | — | 2 (best 0.63) |
Ligands
Experiment against prediction
- 1RKA chain A against the predicted model P0A9J6: TM-score 0.97, RMSD 1.21 Å
- 1RKA chain A against the predicted model P0A9J6: TM-score 0.97, RMSD 1.21 Å
- 1RK2 chain A against the predicted model P0A9J6: TM-score 0.95, RMSD 1.87 Å
- 1RK2 chain A against the predicted model P0A9J6: TM-score 0.95, RMSD 1.87 Å
- 1RK2 chain B against the predicted model P0A9J6: TM-score 0.94, RMSD 1.97 Å
- 1RK2 chain B against the predicted model P0A9J6: TM-score 0.94, RMSD 1.97 Å
- 1RKD chain A against the predicted model P0A9J6: TM-score 0.94, RMSD 2.00 Å
- 1RKD chain A against the predicted model P0A9J6: TM-score 0.94, RMSD 2.00 Å
- 1RKS chain A against the predicted model P0A9J6: TM-score 0.94, RMSD 1.99 Å
- 1RKS chain A against the predicted model P0A9J6: TM-score 0.94, RMSD 1.99 Å
Elsewhere
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