UniProt P06004

Photosystem II CP43 reaction center protein (P06004)

Photosystem II CP43 reaction center protein (UniProt P06004): 3 experimental structures and 1 predicted model on GenesisL1, 8 ligands bound, 7 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…

UniProt: P06004
Protein: Photosystem II CP43 reaction center protein
Experimental structures: 3
Predicted models: 1
Ligands: 8
Pockets: 7 · 1 record with a druggable one

Structures

4 records of P06004 in the MolNFT archive: 3 experimental, 1 predicted.

Entry	Title	Method	Chains	Ligands	Pockets
5XNL	Structure of stacked C2S2M2-type psii-lhcii supercomplex from pisum sativum	electron microscopy	C, c	OEX, CL, SQD, LMG, CLA, BCR	—
5XNM	Structure of unstacked C2S2M2-type psii-lhcii supercomplex from pisum sativum	electron microscopy	C, c	OEX, SQD, LMG, CLA, BCR, DGD	—
6YP7	Psii-lhcii C2S2 supercomplex from pisum sativum grown in high light conditions	electron microscopy	c, C	OEX, CL, CLA, BCR, DGD, LHG	—
P06004	AlphaFold monomer V2.0 prediction for photosystem II CP43 reaction center protein (P06004)	predicted	A	—	7 (best 0.66)

Ligands

BCR · Beta-carotene · in 3 records
CLA · Chlorophyll A · in 3 records
DGD · Digalactosyl diacyl glycerol (dgdg) · in 3 records
LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 3 records
LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 3 records
OEX · Ca-MN4-O5 cluster · in 3 records
SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 3 records
CL · Chloride ion · in 2 records

Experiment against prediction

5XNL chain C against the predicted model P06004: TM-score 0.99, RMSD 0.54 Å
5XNM chain C against the predicted model P06004: TM-score 0.99, RMSD 0.67 Å
6YP7 chain c against the predicted model P06004: TM-score 0.97, RMSD 1.28 Å

Elsewhere

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