UniProt P05647
50S ribosomal protein L34 (P05647)
50S ribosomal protein L34 (UniProt P05647): 34 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 7 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P05647
- Protein
- 50S ribosomal protein L34
- Experimental structures
- 34
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 7 · 7 records with a druggable one
Structures
35 records of P05647 in the MolNFT archive: 34 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 3J3V | Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a) | electron microscopy | 2 | — | — |
| 3J3V | Atomic model of the immature 50S subunit from bacillus subtilis (state I-a) | electron microscopy | 2 | — | — |
| 3J3W | Atomic model of the immature 50S subunit from Bacillus subtilis (state II-a) | electron microscopy | 2 | — | — |
| 3J3W | Atomic model of the immature 50S subunit from bacillus subtilis (state II-a) | electron microscopy | 2 | — | — |
| 3J9W | Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex | electron microscopy | B6 | — | — |
| 5NJT | Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization. | electron microscopy | r | — | — |
| 6HA1 | Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in… | electron microscopy | 2 | — | — |
| 6HA8 | Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome | electron microscopy | 2 | — | — |
| 6HTQ | Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome | electron microscopy | 3 | — | — |
| 6TNN | Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA | electron microscopy | r | — | 1 (best 0.86) |
| 6TNN | Mini-RNase III (mini-III) bound to 50S ribosome with precursor 23S rRNA | electron microscopy | r | — | — |
| 6TPQ | RNase M5 bound to 50S ribosome with precursor 5S rRNA | electron microscopy | r | — | 1 (best 0.82) |
| 6TPQ | RNase M5 bound to 50S ribosome with precursor 5S rRNA | electron microscopy | r | — | — |
| 7AQC | Structure of the bacterial RQC complex (Decoding State) | electron microscopy | d | — | — |
| 7AQC | Structure of the bacterial rqc complex (decoding state) | electron microscopy | d | — | — |
| 7AQD | Structure of the bacterial RQC complex (Translocating State) | electron microscopy | d | — | — |
| 7AQD | Structure of the bacterial rqc complex (translocating state) | electron microscopy | d | — | — |
| 7AS8 | Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA… | electron microscopy | h | — | — |
| 7AS8 | Bacillus subtilis ribosome quality control complex state B. ribosomal 50S subunit with P-tRNA… | electron microscopy | h | — | — |
| 7AS9 | Bacillus subtilis ribosome-associated quality control complex state A. Ribosomal 50S subunit with… | electron microscopy | h | — | — |
| 7AS9 | Bacillus subtilis ribosome-associated quality control complex state a. ribosomal 50S subunit with… | electron microscopy | h | — | — |
| 7O5B | Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with… | electron microscopy | 2 | — | — |
| 7OPE | RqcH DR variant bound to 50S-peptidyl-tRNA-RqcP RQC complex (rigid body refinement) | electron microscopy | h | — | — |
| 7OPE | Rqch dr variant bound to 50S-peptidyl-tRNA-rqcp rqc complex (rigid body refinement) | electron microscopy | h | — | — |
| 7QV1 | Bacillus subtilis collided disome (Leading 70S) | electron microscopy | 2 | — | 1 (best 0.86) |
| 7QV2 | Bacillus subtilis collided disome (Collided 70S) | electron microscopy | 2 | — | — |
| 7QV3 | Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S) | electron microscopy | 2 | — | 1 (best 0.86) |
| 8BUU | ARE-ABCF VmlR2 bound to a 70S ribosome | electron microscopy | 2 | — | — |
| 8QCQ | B. subtilis ApdA-stalled ribosomal complex | electron microscopy | 2 | MG | — |
| 8S1P | YlmH bound to PtRNA-50S | electron microscopy | 2 | MG | — |
| 8S1U | YlmH bound to stalled 50S subunits with RqcH and PtRNA | electron microscopy | 2 | — | — |
| 9BS0 | YphC-treated 45SYphC particle. Class 5 | electron microscopy | U | — | 1 (best 0.85) |
| 9BSL | 45SRbgA particle in complex with RbgA and YphC. Class A | electron microscopy | U | — | 1 (best 0.81) |
| 9BSS | 45SRbgA particle in complex with RbgA and YphC. Class B | electron microscopy | U | — | 1 (best 0.82) |
| P05647 | AlphaFold monomer V2.0 prediction for 50S ribosomal protein L34 (P05647) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 2 records
Experiment against prediction
- 8QCQ chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.42 Å
- 8S1P chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.43 Å
- 7O5B chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.43 Å
- 7QV1 chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.42 Å
- 7QV3 chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.42 Å
- 8BUU chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.45 Å
- 8S1U chain 2 against the predicted model P05647: TM-score 0.96, RMSD 0.44 Å
- 7AQC chain d against the predicted model P05647: TM-score 0.96, RMSD 0.46 Å
- 7AQC chain d against the predicted model P05647: TM-score 0.96, RMSD 0.46 Å
- 7AQD chain d against the predicted model P05647: TM-score 0.96, RMSD 0.46 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.