UniProt P05429
Photosystem II CP47 reaction center protein (P05429)
Photosystem II CP47 reaction center protein (UniProt P05429): 5 experimental structures and 1 predicted model on GenesisL1, 7 ligands bound, 25 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P05429
- Protein
- Photosystem II CP47 reaction center protein
- Experimental structures
- 5
- Predicted models
- 1
- Ligands
- 7
- Pockets
- 25 · 3 records with a druggable one
Structures
6 records of P05429 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6WJ6 | Cryo-EM structure of apo-Photosystem II from Synechocystis sp. PCC 6803 | electron microscopy | B | CLA, BCR, SQD, LMG, LHG, DGD | 8 (best 0.81) |
| 6WJ6 | Cryo-EM structure of apo-photosystem II from synechocystis sp. pcc 6803 | electron microscopy | B | CLA, BCR, SQD, LMG, LHG, DGD | — |
| 7N8O | High-resolution structure of photosystem II from the mesophilic cyanobacterium, synechocystis sp.… | electron microscopy | B, b | SQD, LMG, CLA, BCR, LHG, DGD | — |
| 7RCV | High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp.… | electron microscopy | B, b | SQD, LMG, CLA, BCR, LHG, DGD | 7 (best 0.82) |
| 7RCV | High-resolution structure of photosystem II from the mesophilic cyanobacterium, synechocystis sp.… | electron microscopy | B, b | SQD, LMG, CLA, BCR, LHG, DGD | — |
| P05429 | AlphaFold monomer V2.0 prediction for photosystem II CP47 reaction center protein (P05429) | predicted | A | — | 10 (best 0.58) |
Ligands
- BCR · Beta-carotene · in 5 records
- CLA · Chlorophyll A · in 5 records
- DGD · Digalactosyl diacyl glycerol (dgdg) · in 5 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 5 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 5 records
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 5 records
- CA · Calcium ion · in 3 records
Experiment against prediction
- 7N8O chain B against the predicted model P05429: TM-score 1.00, RMSD 0.40 Å
- 7RCV chain b against the predicted model P05429: TM-score 1.00, RMSD 0.40 Å
- 7RCV chain B against the predicted model P05429: TM-score 1.00, RMSD 0.40 Å
- 7RCV chain B against the predicted model P05429: TM-score 1.00, RMSD 0.40 Å
- 6WJ6 chain B against the predicted model P05429: TM-score 0.99, RMSD 0.63 Å
- 6WJ6 chain B against the predicted model P05429: TM-score 0.99, RMSD 0.63 Å
Elsewhere
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