UniProt B7MIU7
30S ribosomal protein S16 (B7MIU7)
30S ribosomal protein S16 (UniProt B7MIU7): 52 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 25 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- B7MIU7
- Protein
- 30S ribosomal protein S16
- Experimental structures
- 52
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 25 · 17 records with a druggable one
Structures
53 records of B7MIU7 in the MolNFT archive: 52 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5U9F | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | electron microscopy | P | — | — |
| 5U9G | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | electron microscopy | P | — | 1 (best 0.83) |
| 5UZ4 | The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for… | electron microscopy | P | — | 2 (best 0.83) |
| 5UZ4 | The cryo-EM structure of yjeq bound to the 30S subunit suggests a fidelity checkpoint function for… | electron microscopy | P | — | — |
| 5WF0 | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) | electron microscopy | p | MG | — |
| 5WFS | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | electron microscopy | p | MG | — |
| 6AWB | Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state | electron microscopy | S | — | — |
| 6DNC | E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon | electron microscopy | CB | — | 2 (best 0.82) |
| 6O7K | 30S initiation complex | electron microscopy | y | — | 3 (best 0.83) |
| 6O7K | 30S initiation complex | electron microscopy | y | — | — |
| 6O9J | 70S Elongation Competent Ribosome | electron microscopy | p | — | — |
| 6OGF | 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound… | electron microscopy | U | — | — |
| 6OGI | 70S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V) | electron microscopy | U | — | 2 (best 0.85) |
| 6OM6 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | electron microscopy | u | — | — |
| 6ORE | Release complex 70S | electron microscopy | u | — | — |
| 6ORL | RF1 pre-accommodated 70S complex at 24 ms | electron microscopy | u | — | — |
| 6OSK | RF1 accommodated 70S complex at 60 ms | electron microscopy | u | — | 1 (best 0.84) |
| 6OSQ | RF1 accommodated state bound Release complex 70S at long incubation time point | electron microscopy | u | — | — |
| 6OST | RF2 pre-accommodated state bound Release complex 70S at 24ms | electron microscopy | u | — | — |
| 6OT3 | RF2 accommodated state bound Release complex 70S at 24 ms | electron microscopy | u | — | 1 (best 0.82) |
| 6OUO | RF2 accommodated state bound 70S complex at long incubation time | electron microscopy | u | — | 2 (best 0.84) |
| 6VU3 | Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA… | electron microscopy | U | — | — |
| 6VYQ | Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA… | electron microscopy | U | — | — |
| 6VYT | Escherichia coli transcription-translation complex A2 (TTC-A2) containing a 15 nt long mRNA spacer… | electron microscopy | U | — | — |
| 6VYU | Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer | electron microscopy | U | — | — |
| 6VYW | Escherichia coli transcription-translation complex C3 (TTC-C3) containing mRNA with a 27 nt long… | electron microscopy | U | — | — |
| 6VYX | Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long… | electron microscopy | U | — | — |
| 6VYY | Escherichia coli transcription-translation complex C5 (TTC-C5) containing mRNA with a 21 nt long… | electron microscopy | U | — | 1 (best 0.84) |
| 6VYZ | Escherichia coli transcription-translation complex C6 (TTC-C6) containing mRNA with a 21 nt long… | electron microscopy | U | — | 2 (best 0.85) |
| 6VZ2 | Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long… | electron microscopy | U | — | — |
| 6VZ3 | Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long… | electron microscopy | U | — | 1 (best 0.83) |
| 6VZ7 | Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer… | electron microscopy | U | — | — |
| 6WD0 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | electron microscopy | U | — | 1 (best 0.83) |
| 6WD1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B) | electron microscopy | U | — | 2 (best 0.85) |
| 6WD2 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A) | electron microscopy | U | — | — |
| 6WD3 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1) | electron microscopy | U | — | — |
| 6WD4 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2) | electron microscopy | U | — | — |
| 6WD5 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1) | electron microscopy | U | — | 1 (best 0.84) |
| 6WD7 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D) | electron microscopy | U | — | — |
| 6WD8 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A) | electron microscopy | U | — | 1 (best 0.84) |
| 6WDA | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C) | electron microscopy | U | — | 1 (best 0.83) |
| 6X6T | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1)… | electron microscopy | U | — | — |
| 6X7F | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2)… | electron microscopy | U | — | — |
| 6X7K | Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3)… | electron microscopy | U | — | — |
| 6XDR | Escherichia coli transcription-translation complex B (TTC-B) containing an 27 nt long mRNA spacer… | electron microscopy | U | — | — |
| 6XIJ | Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer… | electron microscopy | U | — | — |
| 7K00 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | electron microscopy | P | — | 1 (best 0.85) |
| 7M5D | Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA… | electron microscopy | u | — | — |
| 7S1G | wild-type Escherichia coli stalled ribosome with antibiotic linezolid | electron microscopy | x | — | — |
| 7SA4 | Damaged 70S ribosome with PrfH bound | electron microscopy | u | — | — |
| 7TOS | E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 | electron microscopy | S16 | — | — |
| 7UG7 | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by… | electron microscopy | SP | — | — |
| B7MIU7 | AlphaFold monomer V2.0 prediction for 30S ribosomal protein S16 (B7MIU7) | predicted | A | — | — |
Ligands
- MG · Magnesium ion · in 2 records
Experiment against prediction
- 6ORE chain u against the predicted model B7MIU7: TM-score 0.98, RMSD 0.54 Å
- 7SA4 chain u against the predicted model B7MIU7: TM-score 0.98, RMSD 0.55 Å
- 6VYW chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6X7K chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6VYT chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6X7F chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6VYU chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6VZ7 chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6XIJ chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
- 6VZ3 chain U against the predicted model B7MIU7: TM-score 0.97, RMSD 0.57 Å
Elsewhere
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