UniProt B0CFM0
Photosystem II reaction center protein M (B0CFM0)
Photosystem II reaction center protein M (UniProt B0CFM0): 2 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound, 1 pocket. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- B0CFM0
- Protein
- Photosystem II reaction center protein M
- Experimental structures
- 2
- Predicted models
- 1
- Ligands
- 5
- Pockets
- 1 · 1 record with a druggable one
Structures
3 records of B0CFM0 in the MolNFT archive: 2 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 7YMI | PSII-Pcb Dimer of Acaryochloris Marina | electron microscopy | M, m | CL7, 8CT, SQD, LMG, LHG | — |
| 7YMM | PSII-Pcb Tetramer of Acaryochloris Marina | electron microscopy | 1M, 2M, 3M, 4M | CL7, 8CT, SQD, LMG, LHG | 1 (best 0.77) |
| B0CFM0 | AlphaFold monomer V2.0 prediction for photosystem II reaction center protein M (B0CFM0) | predicted | A | — | — |
Ligands
- 8CT · (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene · in 2 records
- CL7 · Chlorophyll D · in 2 records
- LHG · 1,2-dipalmitoyl-phosphatidyl-glycerole · in 2 records
- LMG · 1,2-distearoyl-monogalactosyl-diglyceride · in 2 records
- SQD · 1,2-di-O-acyl-3-O-[6-deoxy-6-sulfo-alpha-D-glucopyranosyl]-sn-glycerol · in 2 records
Experiment against prediction
- 7YMM chain 2M against the predicted model B0CFM0: TM-score 0.92, RMSD 0.47 Å
- 7YMM chain 4M against the predicted model B0CFM0: TM-score 0.92, RMSD 0.47 Å
- 7YMM chain 1M against the predicted model B0CFM0: TM-score 0.92, RMSD 0.47 Å
- 7YMM chain 3M against the predicted model B0CFM0: TM-score 0.92, RMSD 0.47 Å
- 7YMI chain M against the predicted model B0CFM0: TM-score 0.92, RMSD 0.47 Å
Elsewhere
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