UniProt A0QZ11
RNA polymerase-binding protein RbpA (A0QZ11)
RNA polymerase-binding protein RbpA (UniProt A0QZ11): 27 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 28 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- A0QZ11
- Protein
- RNA polymerase-binding protein RbpA
- Experimental structures
- 27
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 28 · 13 records with a druggable one
Structures
28 records of A0QZ11 in the MolNFT archive: 27 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5TW1 | Crystal structure of a Mycobacterium smegmatis transcription initiation complex with RbpA | x-ray diffraction | J | — | 1 (best 0.74) |
| 5TW1 | Crystal structure of a mycobacterium smegmatis transcription initiation complex with rbpa | x-ray diffraction | J | — | — |
| 5VI5 | Structure of Mycobacterium smegmatis transcription initiation complex with a full transcription… | x-ray diffraction | J | — | 1 (best 0.73) |
| 5VI5 | Structure of mycobacterium smegmatis transcription initiation complex with a full transcription… | x-ray diffraction | J | — | — |
| 5VI8 | Structure of a mycobacterium smegmatis transcription initiation complex with an upstream-fork… | x-ray diffraction | J | — | 1 (best 0.73) |
| 5VI8 | Structure of a mycobacterium smegmatis transcription initiation complex with an upstream-fork… | x-ray diffraction | J | — | — |
| 6CCE | Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6CCE | Crystal structure of a mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6CCV | Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | 1 (best 0.72) |
| 6CCV | Crystal structure of a mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6DCF | Crystal structure of a Mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | — | 1 (best 0.72) |
| 6DCF | Crystal structure of a mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6VVS | Crystal structure of a Mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6VVS | Crystal structure of a mycobacterium smegmatis RNA polymerase transcription initiation complex with… | x-ray diffraction | J | — | — |
| 6VVT | Crystal structure of a Mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | SO4 | 1 (best 0.73) |
| 6VVT | Crystal structure of a mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | SO4 | — |
| 6VVV | Crystal structure of a Mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | — | 2 (best 0.74) |
| 6VVV | Crystal structure of a mycobacterium smegmatis transcription initiation complex with… | x-ray diffraction | J | — | — |
| 7P5X | Mycobacterial RNAP with transcriptional activator PafBC | electron microscopy | AJ | — | — |
| 8Q3I | Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State I | electron microscopy | J | — | — |
| 8QN8 | Mycobacterium smegmatis RNA polymerase in complex with HelD, SigA and RbpA in State II | electron microscopy | J | — | — |
| 8QTI | Mycobacterium smegnatis RNAP open promoter complex with SigmaA and RbpA | electron microscopy | J | — | 2 (best 0.71) |
| 8QU6 | Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD and… | electron microscopy | J | — | 1 (best 0.73) |
| 8R2M | Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD… | electron microscopy | J | — | 4 (best 0.81) |
| 8R3M | Mycobacterium smegnatis RNA polymerase transcription initiation complex with SigmaA, RbpA, HelD… | electron microscopy | J | — | 4 (best 0.89) |
| 8R6P | Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA… | electron microscopy | J | — | 4 (best 0.76) |
| 8R6R | Mycobacterium smegnatis RNA polymerase RP2-like transcription initiation complex with SigmaA, RbpA… | electron microscopy | J | — | 5 (best 0.79) |
| A0QZ11 | AlphaFold monomer V2.0 prediction for RNA polymerase-binding protein rbpa (A0QZ11) | predicted | A | — | — |
Ligands
- SO4 · Sulfate ion · in 2 records
Experiment against prediction
- 6CCV chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.35 Å
- 6CCV chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.35 Å
- 6VVS chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.36 Å
- 6VVS chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.36 Å
- 5VI8 chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.40 Å
- 5VI8 chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.40 Å
- 5TW1 chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.40 Å
- 5TW1 chain J against the predicted model A0QZ11: TM-score 0.87, RMSD 1.40 Å
- 6CCE chain J against the predicted model A0QZ11: TM-score 0.86, RMSD 1.12 Å
- 6CCE chain J against the predicted model A0QZ11: TM-score 0.86, RMSD 1.12 Å
Elsewhere
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