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Ligand · ZDR

ZDR · (2R,6S)-2,6-diamino-2-methylheptanedioic acid

ZDR, (2R,6S)-2,6-diamino-2-methylheptanedioic acid (C8 H16 N2 O4, 204.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
ZDR
Formula
C8 H16 N2 O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

ZDR in 4 structures; the first of them:

  • 2GKJ · Crystal structure of diaminopimelate epimerase in complex with an irreversible inhibitor… · ZDR A700 · binds ASN11, PHE13, GLN44, ASN64, VAL70, GLN72, CYS73, GLY74 and 11 more
  • 3EKM · Crystal structure of diaminopimelate epimerase form arabidopsis thaliana in complex with… · ZDR A500 · binds ASN37, PHE39, ASN90, PRO96, MET98, CYS99, GLY100, ASN101 and 11 more
  • 2GKJ · Crystal structure of diaminopimelate epimerase in complex with an irreversible inhibitor… · ZDR A700 · binds ASN11, PHE13, GLN44, ASN64, VAL70, GLN72, CYS73, GLY74 and 11 more
  • 3EKM · Crystal structure of diaminopimelate epimerase form arabidopsis thaliana in complex with… · ZDR A500 · binds ASN37, PHE39, ASN90, PRO96, MET98, CYS99, GLY100, ASN101 and 11 more

Residues it binds most

ASN 14, GLY 14, CYS 14, ALA 14, ARG 14, GLU 14, PHE 14, MET 12, PRO 12, THR 12 (residue and the binding sites it lines).

Found with

  • ACY · Acetic acid

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