GL1X · GenesisL1 explorer

Ligand · ZDP

ZDP · (2S,6S)-2,6-diamino-2-methylheptanedioic acid

ZDP, (2S,6S)-2,6-diamino-2-methylheptanedioic acid (C8 H16 N2 O4, 204.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
ZDP
Formula
C8 H16 N2 O4
Class
ligand
Structures
4
PDB entries
2

Binding sites

ZDP in 4 structures; the first of them:

  • 2GKE · Crystal structure of diaminopimelate epimerase in complex with an irreversible inhibitor… · ZDP A700 · binds ASN11, PHE13, GLN44, ASN64, VAL70, GLN72, CYS73, GLY74 and 10 more
  • 3EJX · Crystal structure of diaminopimelate epimerase from Arabidopsis thaliana in complex with… · ZDP A500 · binds ASN37, PHE39, ILE88, ASN90, PRO96, MET98, CYS99, GLY100 and 11 more
  • 2GKE · Crystal structure of diaminopimelate epimerase in complex with an irreversible inhibitor… · ZDP A700 · binds ASN11, PHE13, GLN44, ASN64, VAL70, GLN72, CYS73, GLY74 and 10 more
  • 3EJX · Crystal structure of diaminopimelate epimerase from arabidopsis thaliana in complex with… · ZDP A500 · binds ASN37, PHE39, ILE88, ASN90, PRO96, MET98, CYS99, GLY100 and 11 more

Residues it binds most

ASN 14, GLY 14, CYS 14, ALA 14, GLU 14, ARG 14, PHE 14, MET 12, PRO 12, THR 12 (residue and the binding sites it lines).

Found with

  • ACY · Acetic acid
  • GOL · Glycerol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.