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Ligand · Z5L

Z5L · Methyl 2-thio-alpha-D-mannopyranoside

Z5L, Methyl 2-thio-alpha-D-mannopyranoside (C7 H14 O5 S, 210.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
Z5L
Formula
C7 H14 O5 S
Class
ligand
Structures
1
PDB entries
1

Binding sites

Z5L in 1 structure; the first of them:

  • 5KK7 · Crystal structure of the class I human endoplasmic reticulum 1,2- alpha-mannosidase T688A… · Z5L C1 · binds PHE329, ALA396, GLU397, ALA460, ARG461, ASP463, LEU525

Residues it binds most

ALA 2, ARG 2, ASP 2, GLU 2, LEU 2, PHE 2 (residue and the binding sites it lines).

Found with

  • 1PS · 3-pyridinium-1-ylpropane-1-sulfonate
  • CA · Calcium ion
  • MAN · alpha-D-mannopyranose
  • SO4 · Sulfate ion
  • ACT · Acetate ion
  • BU1 · 1,4-butanediol

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