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Ligand · Z47

Z47 · (2R,3S,4R,5S,6R)-2-(hydroxymethyl)-6-[3-(naphthalen-1-yl)propyl]oxane-3,4,5-triol

Z47, (2R,3S,4R,5S,6R)-2-(hydroxymethyl)-6-[3-(naphthalen-1-yl)propyl]oxane-3,4,5-triol (C19 H24 O5, 332.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
Z47
Formula
C19 H24 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

Z47 in 2 structures; the first of them:

  • 5ABZ · Complex of the FimH lectin with a C-linked naphtyl alpha-D-mannoside in soaked trigonal… · Z47 A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more
  • 5ABZ · Complex of the fimh lectin with a C-linked naphtyl alpha-D-mannoside in soaked trigonal… · Z47 A201 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 4 more

Residues it binds most

ASP 4, ASN 4, ILE 4, PHE 4, TYR 4, GLN 4, ARG 2 (residue and the binding sites it lines).

Found with

  • NI · Nickel (II) ion

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