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Ligand · Z1T

Z1T · N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide

Z1T, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide (C42 H83 N O3, 650.1 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
Z1T
Formula
C42 H83 N O3
Class
ligand
Structures
5
PDB entries
5

Binding sites

Z1T in 5 structures; the first of them:

  • 7YJK · Cryo-EM structure of the dimeric atSPT-ORM1 complex · Z1T B502 · binds TYR13, PHE14, TYR16, GLY17, PHE20, ALA21, TYR55, LEU435 and 17 more
  • 7YJM · Cryo-EM structure of the monomeric atSPT-ORM1 complex · Z1T D201 · binds TYR13, TYR16, GLY17, LEU18, PHE20, ALA21, TYR55, PHE430 and 19 more
  • 7YJO · Cryo-EM structure of the monomeric atSPT-ORM1 (LCB2a-deltaN5) complex · Z1T D201 · binds TYR13, PHE14, TYR16, GLY17, LEU18, PHE20, ALA21, TYR55 and 20 more
  • 8IAJ · Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A) complex · Z1T B602 · binds TYR65, TYR68, LEU69, ILE72, ILE73, HIS76, VAL77, PHE106 and 17 more
  • 8IAM · Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3D) complex · Z1T D301 · binds TYR65, TYR68, LEU69, ILE72, ILE73, HIS76, VAL77, PHE80 and 20 more

Residues it binds most

TYR 8, PHE 8, LEU 8, VAL 8, ILE 8, GLY 8, HIS 8, MET 8, TRP 8, THR 8 (residue and the binding sites it lines).

Found with

  • PLP · Pyridoxal-5'-phosphate
  • PLS · [3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-serine

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