Ligand · YQM
YQM · Eravacycline
YQM, Eravacycline (C27 H31 F N4 O8, 558.6 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- YQM
- Formula
- C27 H31 F N4 O8
- Class
- ligand
- Structures
- 6
- PDB entries
- 5
Binding sites
YQM in 6 structures; the first of them:
- 7M4U · A. baumannii Ribosome-Eravacycline complex: 30S · YQM a1601 · binds 2MG963, G1050, C1051, C1192, A1193, A1194, G1195
- 7M4W · A. baumannii Ribosome-Eravacycline complex: Empty 70S · YQM A3201 · binds G1022, G1023, A1024, A1025, A1131, C1132, G1133, G2483 and 1 more
- 7M4Z · A. baumannii Ribosome-Eravacycline complex: hpf-bound 70S · YQM A3201 · binds G1022, G1023, A1024, A1025, A1131, C1132, G1133, G2483 and 1 more
- 7M4P · Multidrug efflux pump adej with eravacycline bound · YQM B1105 · binds PHE136, VAL139, PHE178, GLY179, GLY180, TYR327, VAL613, PHE616 and 2 more
- 7M4U · A. baumannii ribosome-eravacycline complex: 30S · YQM a1601 · binds G1050, C1051, C1192, A1193, A1194, G1195
- 7M4V · A. baumannii ribosome-eravacycline complex: 50S · YQM A3201 · binds G1022, G1023, A1024, A1131, G1133, G2483, G2484
Residues it binds most
G 7, A 9, C 6, PHE 1, 2MG 2, GLY 1, VAL 1, TYR 1 (residue and the binding sites it lines).
Found with
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