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Ligand · YNC

YNC · Tetradec-13-ynoic acid - coa thioester

YNC, Tetradec-13-ynoic acid - coa thioester (C35 H58 N7 O17 P3 S, 973.9 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
YNC
Formula
C35 H58 N7 O17 P3 S
Class
ligand
Structures
7
PDB entries
4

Binding sites

YNC in 7 structures; the first of them:

  • 6MAZ · Crystal structure of N-myristoyl transferase (NMT) G386E mutant from Plasmodium vivax in… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 28 more
  • 6MB0 · Crystal structure of N-myristoyl transferase (NMT) G386E mutant from Plasmodium vivax in… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 28 more
  • 6MB1 · Crystal structure of N-myristoyl transferase (NMT) from Plasmodium vivax in complex with… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 28 more
  • 6MAY · Crystal structure of N-myristoyl transferase (nmt) G386E mutant from plasmodium vivax · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 23 more
  • 6MAZ · Crystal structure of N-myristoyl transferase (nmt) G386E mutant from plasmodium vivax in… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 25 more
  • 6MB0 · Crystal structure of N-myristoyl transferase (nmt) G386E mutant from plasmodium vivax in… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 24 more
  • 6MB1 · Crystal structure of N-myristoyl transferase (nmt) from plasmodium vivax in complex with… · YNC A501 · binds TYR28, LYS29, PHE30, TRP31, ASN94, TYR95, VAL96, VAL160 and 23 more

Residues it binds most

TYR 21, VAL 21, LEU 21, ASN 21, ILE 21, ALA 21, ARG 21, PHE 21, THR 21, TRP 21 (residue and the binding sites it lines).

Found with

  • CL · Chloride ion
  • SO4 · Sulfate ion
  • EDO · 1,2-ethanediol
  • JCY · 1-(5-{4-fluoro-2-[2-(1,3,5-trimethyl-1H-pyrazol-4-yl) ethoxy]phenyl}-1-methyl-1H-indazol-3-yl)-N,N-dimethylmethanamine
  • 646 · 2,6-dichloro-4-(2-piperazin-1-ylpyridin-4-yl)-N-(1,3,5-trimethyl-1H-pyrazol-4-yl)benzenesulfonamide

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