GL1X · GenesisL1 explorer

Ligand · YN7

YN7 · 5-{(5S)-1-[2-({3-chloro-6-[(2S)-2,4-dimethylpiperazin-1-yl]-2-fluoropyridin-4-yl}amino)-2-oxoethyl]-4-oxo-4, 6,7,8-tetrahydro-1H-dipyrrolo[1,2-A:2',3'-d]pyrimidin-3-yl}-3,4-difluoro-2-hydroxybenzamide

YN7, 5-{(5S)-1-[2-({3-chloro-6-[(2S)-2,4-dimethylpiperazin-1-yl]-2-fluoropyridin-4-yl}amino)-2-oxoethyl]-4-oxo-4, 6,7,8-tetrahydro-1H-dipyrrolo[1,2-A:2',3'-d]pyrimidin-3-yl}-3,4-difluoro-2-hydroxybenzamide (C29 H28 Cl F3 N8 O4, 645.0…

Component
YN7
Formula
C29 H28 Cl F3 N8 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

YN7 in 2 structures; the first of them:

  • 7LWG · Crystal structure of the BCL6 BTB domain in complex with OICR-12694 · YN7 A201 · binds MET51, ALA52, CYS53, SER54, GLY55, TYR58, PHE89, GLN113 and 12 more
  • 7LWG · Crystal structure of the BCL6 btb domain in complex with oicr-12694 · YN7 A201 · binds MET51, ALA52, CYS53, SER54, GLY55, TYR58, PHE89, GLN113 and 12 more

Residues it binds most

ARG 4, HIS 4, MET 4, PHE 4, VAL 4, ALA 4, ASN 4, ASP 4, CYS 4, GLN 4 (residue and the binding sites it lines).

Found with

  • UNX · Unknown atom or ion
  • GOL · Glycerol

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