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Ligand · YGL

YGL · 2-amino-5,6-diphenyl-3H-pyrrolo[2,3-d]pyrimidin-4(7H)-one

YGL, 2-amino-5,6-diphenyl-3H-pyrrolo[2,3-d]pyrimidin-4(7H)-one (C18 H14 N4 O, 302.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds…

Component
YGL
Formula
C18 H14 N4 O
Class
ligand
Structures
2
PDB entries
1

Binding sites

YGL in 2 structures; the first of them:

  • 4CM9 · Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary… · YGL A1270 · binds ARG14, SER95, PHE97, ASP161, MET163, CYS168, TYR174, GLY205 and 6 more
  • 4CM9 · Crystal structure of pteridine reductase 1 (PTR1) from trypanosoma brucei in ternary… · YGL A1270 · binds ARG14, SER95, PHE97, ASP161, MET163, CYS168, TYR174, GLY205 and 6 more

Residues it binds most

LEU 8, MET 8, SER 8, ARG 8, ASP 8, GLY 8, PHE 8, PRO 8, TYR 8, VAL 8 (residue and the binding sites it lines).

Found with

  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
  • ACT · Acetate ion
  • DTT · 2,3-dihydroxy-1,4-dithiobutane

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